Miyakogusa Predicted Gene
- Lj0g3v0339859.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0339859.1 tr|G4XE00|G4XE00_BRAOL Organelle transcript
processing 82 (Fragment) OS=Brassica oleracea GN=otp82
P,28.4,3e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat; PPR_2,P,CUFF.23247.1
(1918 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60225 weakly similar to UniRef100_A7PPC3 Cluster: Chr... 1505 0.0
>gnl|LJGI|TC60225 weakly similar to UniRef100_A7PPC3 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 770
Score = 1505 bits (759), Expect = 0.0
Identities = 762/763 (99%)
Strand = Plus / Plus
Query: 1 atgagcatcgtgcaacaccgtccccagacggcggtggcgccgcctggttccggcgagccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 atgagcatcgtgcaacaccgtccccagacggcggtggcgccgcctggttccggcgagccg 67
Query: 61 aaacgccaccctgtgaacccaacgacggcatggaaccttcgcctaatggagctatcaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aaacgccaccctgtgaacccaacgacggcatggaaccttcgcctaatggagctatcaaag 127
Query: 121 cagcggcagtacaaggaagccctatccctataccgccacatgctccgctcctccttcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cagcggcagtacaaggaagccctatccctataccgccacatgctccgctcctccttcctc 187
Query: 181 cccaacaccttcaccttcccctttctcctcaaatcctgcgccatcctctccctccccctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cccaacaccttcaccttcccctttctcctcaaatcctgcgccatcctctccctccccctc 247
Query: 241 accggtttccagctccacgcccatgtcatccgaaccgggtcacaacccgacccgtacacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 accggtttccagctccacgcccatgtcatccgaaccgggtcacaacccgacccgtacacc 307
Query: 301 cgctcctccctcatctccatgtactccaaatgctccctccccttcctcgctcgcagagtc 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cgctcatccctcatctccatgtactccaaatgctccctccccttcctcgctcgcagagtc 367
Query: 361 ttcgacgaaactcacaacctccccatctcctacaacgccatgatctccggctactccctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttcgacgaaactcacaacctccccatctcctacaacgccatgatctccggctactccctc 427
Query: 421 aactccatgttcgccgacgccgttagcctcttccgccgtatgcgccgcgaagatgggtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aactccatgttcgccgacgccgttagcctcttccgccgtatgcgccgcgaagatgggtcg 487
Query: 481 tcgacggttaagttcaacttcaactccgtcaccatgctgggtttagtttccggttgcaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcgacggttaagttcaacttcaactccgtcaccatgctgggtttagtttccggttgcaac 547
Query: 541 ctccccaaccacttacccaccggaacctgccttcacggttgcgcggtgacgttcgggttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctccccaaccacttacccaccggaacctgccttcacggttgcgcggtgacgttcgggttg 607
Query: 601 gacgctgatttggctgttatgaatagttttcttacaatgtatgtgaaatgcggcgaggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gacgctgatttggctgttatgaatagttttcttacaatgtatgtgaaatgcggcgaggtt 667
Query: 661 gaacttgcgcgccaactgttcgatgaaatgcttgtgagggatttgatctcgtggaacgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaacttgcgcgccaactgttcgatgaaatgcttgtgagggatttgatctcgtggaacgct 727
Query: 721 atggtttccggttacgcgcaaaacgggcacgctgcgcgtgttt 763
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 atggtttccggttacgcgcaaaacgggcacgctgcgcgtgttt 770