Miyakogusa Predicted Gene
- Lj0g3v0339639.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0339639.1 tr|B9H6Q5|B9H6Q5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_760589 PE=4
SV=1,75.68,0.00000002,coiled-coil,NULL; seg,NULL; SPT2,Chromatin
SPT2,CUFF.23231.1
(183 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP045004 similar to UniRef100_A7R5Y8 Cluster: Chromosom... 192 5e-49
gnl|LJGI|GO023847 similar to UniRef100_UPI0000141A8E Cluster: te... 92 1e-18
gnl|LJGI|TC69543 weakly similar to UniRef100_A7R5Y8 Cluster: Chr... 90 5e-18
gnl|LJGI|TC82033 weakly similar to UniRef100_A0BYM8 Cluster: Chr... 70 5e-12
>gnl|LJGI|BP045004 similar to UniRef100_A7R5Y8 Cluster: Chromosome undetermined
scaffold_1099, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1099,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 516
Score = 192 bits (97), Expect = 5e-49
Identities = 101/103 (98%)
Strand = Plus / Minus
Query: 81 ctttgaggaaatcatgagggaagaaaggaggagtgccaaaattgcgagaagagaggatga 140
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 516 ctttgaggaaatcatgagggaagaaaggaggagtgccnaaattgcgagaagagaggatga 457
Query: 141 ggagcaacttaggttaatcgaggaggaagagaaaaggatgcgg 183
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggagcnacttaggttaatcgaggaggaagagaaaaggatgcgg 414
>gnl|LJGI|GO023847 similar to UniRef100_UPI0000141A8E Cluster: tetra-peptide repeat
homeobox-like (TPRXL) on chromosome 3; n=1; Homo
sapiens|Rep: tetra-peptide repeat homeobox-like (TPRXL)
on chromosome 3 - Homo sapiens, partial (20%)
Length = 644
Score = 91.7 bits (46), Expect = 1e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 55 gatgatgatgataatatggaggcaggctttgaggaaatcatgagggaagaaaggaggagt 114
||||| |||||||| ||||||||||||||||| |||||||||||||| |||| |||||||
Sbjct: 536 gatgacgatgataacatggaggcaggctttgatgaaatcatgagggaggaaaagaggagt 595
Query: 115 gccaaaattgcgagaagagaggatgaggagcaacttag 152
|| |||||| | || |||||||||||||| |||||
Sbjct: 596 gcactaattgctaaaaaggaggatgaggagcagcttag 633
>gnl|LJGI|TC69543 weakly similar to UniRef100_A7R5Y8 Cluster: Chromosome undetermined
scaffold_1099, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1099,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 711
Score = 89.7 bits (45), Expect = 5e-18
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 55 gatgatgatgataatatggaggcaggctttgaggaaatcatgagggaagaaaggaggagt 114
||||| |||||||| ||||||||||||||||| ||||||||| |||| |||| |||||||
Sbjct: 385 gatgacgatgataacatggaggcaggctttgatgaaatcatgggggaggaaaagaggagt 444
Query: 115 gccaaaattgcgagaagagaggatgaggagcaacttaggtt 155
|| |||||| | || |||||||||||||| ||||||||
Sbjct: 445 gcactaattgctaaaaaggaggatgaggagcagcttaggtt 485
>gnl|LJGI|TC82033 weakly similar to UniRef100_A0BYM8 Cluster: Chromosome undetermined
scaffold_137, whole genome shotgun sequence; n=1;
Paramecium tetraurelia|Rep: Chromosome undetermined
scaffold_137, whole genome shotgun sequence - Paramecium
tetraurelia, partial (5%)
Length = 480
Score = 69.9 bits (35), Expect = 5e-12
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 61 gatgataatatggaggcaggctttgaggaaatcatgagggaagaaaggaggagtgccaaa 120
|||||||| ||||||||||||||||| | | |||||||||| |||| ||||||||||
Sbjct: 78 gatgataacatggaggcaggctttgatgtattcatgagggaggaaaagaggagtgccctc 137
Query: 121 attgcgagaagagaggatgaggagcaacttaggtt 155
||||| | || ||||||||||| || ||||||||
Sbjct: 138 attgctaaaaaggaggatgaggaccagcttaggtt 172