Miyakogusa Predicted Gene

Lj0g3v0339169.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0339169.1 tr|B0BLI6|B0BLI6_LOTJA CM0216.400.nc protein
OS=Lotus japonicus GN=CM0216.400.nc PE=4 SV=1,50.56,3e-17,seg,NULL; no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; Pe,CUFF.23202.1
         (1047 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63203 weakly similar to UniRef100_Q0DH21 Cluster: Os0...    66   5e-10

>gnl|LJGI|TC63203 weakly similar to UniRef100_Q0DH21 Cluster: Os05g0496400 protein;
           n=1; Oryza sativa Japonica Group|Rep: Os05g0496400
           protein - Oryza sativa subsp. japonica (Rice), partial
           (10%)
          Length = 1306

 Score = 65.9 bits (33), Expect = 5e-10
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 508 ccaggtgacatcctcttcgtccacctcattgcctatggctgttctgatggcgttattatt 567
           |||||||||||||| ||| |||||||||| ||| ||||||| |||||||||  ||| | |
Sbjct: 390 ccaggtgacatccttttcatccacctcatcgcccatggctgctctgatggcaatatcact 449

                    
Query: 568 acttctgat 576
           |||||||||
Sbjct: 450 acttctgat 458