Miyakogusa Predicted Gene

Lj0g3v0338729.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0338729.1 Non Chatacterized Hit- tr|J3PNB4|J3PNB4_PUCT1
Uncharacterized protein OS=Puccinia triticina
(isolate,66.67,0.082,seg,NULL; Dimer_Tnp_hAT,HAT
dimerisation,CUFF.23163.1
         (312 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72029 similar to UniRef100_Q2HTZ2 Cluster: HAT dimeri...   440   e-123
gnl|LJGI|GO010521                                                      50   8e-06

>gnl|LJGI|TC72029 similar to UniRef100_Q2HTZ2 Cluster: HAT dimerisation; n=1;
           Medicago truncatula|Rep: HAT dimerisation - Medicago
           truncatula (Barrel medic), partial (54%)
          Length = 557

 Score =  440 bits (222), Expect = e-123
 Identities = 225/226 (99%)
 Strand = Plus / Plus

                                                                       
Query: 87  aggtcctttgtcaagtgatattgaagaacttcttgaagaatttgaaaagcttgagcaaga 146
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 154 aggtcctttgtcaagtgatattgaagaacttcttgaagaatttgaaaaacttgagcaaga 213

                                                                       
Query: 147 aatggagccaagtacacaacctattcaagatgaatcttctgatgcagagtcggagcagct 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aatggagccaagtacacaacctattcaagatgaatcttctgatgcagagtcggagcagct 273

                                                                       
Query: 207 ggaactgttagaagccttcctaagctattacttagtgcaattgtctactatgaagacatg 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ggaactgttagaagccttcctaagctattacttagtgcaattgtctactatgaagacatg 333

                                                         
Query: 267 tcacgtggactcgtggagtggagccatggaaattgaagattgatga 312
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcacgtggactcgtggagtggagccatggaaattgaagattgatga 379



 Score =  129 bits (65), Expect = 1e-29
 Identities = 65/65 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atgccggtatctaccgttgcttcagaatccgcattcagcactaggggtcgagttctgaat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 atgccggtatctaccgttgcttcagaatccgcattcagcactaggggtcgagttctgaat 85

               
Query: 61 aatta 65
          |||||
Sbjct: 86 aatta 90


>gnl|LJGI|GO010521 
          Length = 646

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 19  gcttcagaatccgcattcagcactaggggtcga 51
           ||||||||||| |||||||||||||| ||||||
Sbjct: 476 gcttcagaatcggcattcagcactagtggtcga 508