Miyakogusa Predicted Gene
- Lj0g3v0338379.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0338379.1 tr|Q9FMU9|Q9FMU9_ARATH Farnesylated protein 3
OS=Arabidopsis thaliana GN=FP3 PE=4 SV=1,38.51,9e-19,coiled-coil,NULL;
OS09G0327800 PROTEIN,NULL; COPPER TRANSPORT PROTEIN
ATOX1-RELATED,NULL; no descrip,CUFF.23140.1
(987 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69101 similar to UniRef100_A7QEU2 Cluster: Chromosome... 979 0.0
gnl|LJGI|AV775813 homologue to UniRef100_A7QEU2 Cluster: Chromos... 133 2e-30
gnl|LJGI|GO019937 72 7e-12
>gnl|LJGI|TC69101 similar to UniRef100_A7QEU2 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1520
Score = 979 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Plus
Query: 154 cctaaaccaccagctccatgtgttctttatgtggacttgcattgtgtgggatgtgcaaag 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cctaaaccaccagctccatgtgttctttatgtggacttgcattgtgtgggatgtgcaaag 469
Query: 214 aaaattgagagatatatgatgaaaatgagaggagttgagggactggtaattgacatggct 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aaaattgagagatatatgatgaaaatgagaggagttgagggactggtaattgacatggct 529
Query: 274 aagaatgaagtgaccataaagggtatagtggagcctcaagcaatctgtgacatgattact 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aagaatgaagtgaccataaagggtatagtggagcctcaagcaatctgtgacatgattact 589
Query: 334 aagaaaacaaagagaagagcaaaagttatatctccattgcctgcagcagaaggagaacct 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aagaaaacaaagagaagagcaaaagttatatctccattgcctgcagcagaaggagaacct 649
Query: 394 ataccagaagttgtcaattctcaggttagtggaccagttacagtggaacttaatgtgaac 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ataccagaagttgtcaattctcaggttagtggaccagttacagtggaacttaatgtgaac 709
Query: 454 atgcactgtgaggcctgtgctgagcaactcaagagaaagatactccaaatgagaggagtt 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atgcactgtgaggcctgtgctgagcaactcaagagaaagatactccaaatgagaggagtt 769
Query: 514 caaacagcagtgacagagttcaccacaggcaaggttttggtgacagggaccatggatgca 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 caaacagcagtgacagagttcaccacaggcaaggttttggtgacagggaccatggatgca 829
Query: 574 aacaagctagtggaatatgtctacagacgaaccaagaagcaagccaagatagttccccaa 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 aacaagctagtggaatatgtctacagacgaaccaagaagcaagccaagatagttccccaa 889
Query: 634 ccagaacctgaacc 647
||||||||||||||
Sbjct: 890 ccagaacctgaacc 903
Score = 305 bits (154), Expect = 3e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 834 caataacggggcagtggttaacatggaagaggaattaagcatgaagaggatgatgtacta 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 caataacggggcagtggttaacatggaagaggaattaagcatgaagaggatgatgtacta 1149
Query: 894 ttaccagtaccctccactctatgtgattgaacgcatgcctccacctcagcttttcagtga 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 ttaccagtaccctccactctatgtgattgaacgcatgcctccacctcagcttttcagtga 1209
Query: 954 tgaaaatccaaatgcatgctgcatttcatgaaat 987
||||||||||||||||||||||||||||||||||
Sbjct: 1210 tgaaaatccaaatgcatgctgcatttcatgaaat 1243
Score = 71.9 bits (36), Expect = 7e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 atgggtgaggaagcaaaacaggaacaacctcaggct 36
||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgggtgaggaagcaaaacaggaacaacctcaggct 292
>gnl|LJGI|AV775813 homologue to UniRef100_A7QEU2 Cluster: Chromosome chr16
scaffold_86, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_86, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 466
Score = 133 bits (67), Expect = 2e-30
Identities = 108/119 (90%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 847 gtggttaacatggaagaggaattaagcatgaagaggatgatgtactattaccagtaccct 906
|||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 417 gtggctaacatggaagaggaattaagcatgaagaggatgatgtactattacccgacccct 358
Query: 907 ccactctatgtgattgaacgcatgcct-ccacctcagct-tttcagtgatgaaaatcca 963
|| ||||| |||||||||||||||||| || || ||||| ||||||||||| |||||||
Sbjct: 357 cccctctaagtgattgaacgcatgcctccccccccagctctttcagtgatggaaatcca 299
>gnl|LJGI|GO019937
Length = 653
Score = 71.9 bits (36), Expect = 7e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 atgggtgaggaagcaaaacaggaacaacctcaggct 36
||||||||||||||||||||||||||||||||||||
Sbjct: 516 atgggtgaggaagcaaaacaggaacaacctcaggct 551