Miyakogusa Predicted Gene
- Lj0g3v0337719.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0337719.3 tr|Q7M739|Q7M739_MOUSE Nuclear pore
complex-associated intranuclear coiled-coil protein TPR OS=Mus
m,50,0.007,seg,NULL,CUFF.23348.3
(513 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73056 homologue to UniRef100_Q59IV6 Cluster: Plastidi... 474 e-133
gnl|LJGI|TC73452 similar to UniRef100_A7PF27 Cluster: Chromosome... 151 5e-36
>gnl|LJGI|TC73056 homologue to UniRef100_Q59IV6 Cluster: Plastidic phosphate
translocator-like protein1; n=1; Mesembryanthemum
crystallinum|Rep: Plastidic phosphate translocator-like
protein1 - Mesembryanthemum crystallinum (Common ice
plant), partial (34%)
Length = 488
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 275 tagacgtcgcgagacatggagacgggttcgacgaggcggaggacgcggacgaggaagaag 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tagacgtcgcgagacatggagacgggttcgacgaggcggaggacgcggacgaggaagaag 312
Query: 335 gcgagggaggcgcagaaggacatgtggatcatggtgagggagattgggaatggccaattg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gcgagggaggcgcagaaggacatgtggatcatggtgagggagattgggaatggccaattg 252
Query: 395 tacatcttcttgtcgaggatgtatttgttgtagacgattacggtgaaggagaggaagatc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tacatcttcttgtcgaggatgtatttgttgtagacgattacggtgaaggagaggaagatc 192
Query: 455 catatggctacgtaggtgtaggagaggacgatcttcttcactacgccgtcgcttagaga 513
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 catatggctacgtaggtgtaggagaggacgatcttcttcactacgccgtcgcttagaga 133
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 158 acgggcatgagggctttgagcatttggatga 188
|||||||||||||||||||||||||||||||
Sbjct: 488 acgggcatgagggctttgagcatttggatga 458
>gnl|LJGI|TC73452 similar to UniRef100_A7PF27 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 845
Score = 151 bits (76), Expect = 5e-36
Identities = 178/212 (83%)
Strand = Plus / Minus
Query: 281 tcgcgagacatggagacgggttcgacgaggcggaggacgcggacgaggaagaaggcgagg 340
||||| |||||||| || || |||||||| || |||||||||||||| | | ||||||
Sbjct: 465 tcgcgcgacatggaaacaggctcgacgagcttgaagacgcggacgaggaggtaagcgagg 406
Query: 341 gaggcgcagaaggacatgtggatcatggtgagggagattgggaatggccaattgtacatc 400
|||| ||| || |||||||||||||||||| ||||| ||| ||||||| |||||||||
Sbjct: 405 gaggagcaaaaccccatgtggatcatggtgagcgagatcgggtatggccagttgtacatc 346
Query: 401 ttcttgtcgaggatgtatttgttgtagacgattacggtgaaggagaggaagatccatatg 460
|| ||||||||||| |||||||| ||||| ||||||||| |||||||||||| ||
Sbjct: 345 ttgcgatcgaggatgtacttgttgtatacgatgacggtgaagctgaggaagatccaaatc 286
Query: 461 gctacgtaggtgtaggagaggacgatcttctt 492
|| ||||||||||||||||||| ||| |||||
Sbjct: 285 gcgacgtaggtgtaggagaggatgattttctt 254