Miyakogusa Predicted Gene
- Lj0g3v0337679.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0337679.2 Non Chatacterized Hit- tr|D8QPI1|D8QPI1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,44.64,0.00000000005,Homeodomain-like,Homeodomain-like; no
description,Homeodomain-like; Homeobox,Homeodomain;
HOMEOBOX_2,CUFF.23085.2
(498 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73497 similar to UniRef100_A7P5Q4 Cluster: Chromosome... 930 0.0
gnl|LJGI|BP077774 similar to UniRef100_A7P5Q4 Cluster: Chromosom... 161 5e-39
>gnl|LJGI|TC73497 similar to UniRef100_A7P5Q4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (64%)
Length = 1175
Score = 930 bits (469), Expect = 0.0
Identities = 487/493 (98%)
Strand = Plus / Plus
Query: 1 atgaagaaattggctagagctttaaaaactggacgccgtaaaactagtataaaaagtttg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 522 atgaagaaattggctagagctttaagaactggacgccgtaaaactagtataaaaagtttg 581
Query: 61 gctgctgagctttgtcttgatagggctcttgttcttgaattgctccgcaaccctcctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gctgctgagctttgtcttgatagggctcttgttcttgaattgctccgcaaccctcctcca 641
Query: 121 aatcttctaatgatgagtctatcagtacctgatgaacccccagcgaccgtagttgaatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aatcttctaatgatgagtctatcagtacctgatgaacccccagcgaccgtagttgaatcg 701
Query: 181 aaactcggagagactattattaatgaaacaagtctggacagtggggaatctgaacccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaactcggagagactattattaatgaaacaagtctggacagtggggaatctgaacccaag 761
Query: 241 gctcaagtacctattcataccatgcagcgcagttggtctgctcaaaagagattgaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 762 gctcaagtacctattcataccatgcagcgcagttggtctgctccaaagagattgaaaaaa 821
Query: 301 gcccatgttgacactttggagagagtttataggagatcgaaacggcccactaatacaatg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 822 gcccatgttgacactttggagagagtttataggagatcgaaacggcccactaataccatg 881
Query: 361 atcagtagtattgtgcatgtaacaaacattcccagaagaaaagttgttaagtggtttgaa 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 882 atcagtagtattgtgcatgtaaccaacattcccagaagaaaagttgttaagtggtttgaa 941
Query: 421 gacaaacgcgccgaggatggagttcctgatcgccgtcttccttaccagcgttccactgcc 480
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 942 gaccaacgcgccgaggatggagttcctgatcgccgtcttccttaccagcgttcccctgcc 1001
Query: 481 gaagaaactgcgt 493
|||||||||||||
Sbjct: 1002 gaagaaactgcgt 1014
>gnl|LJGI|BP077774 similar to UniRef100_A7P5Q4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 356
Score = 161 bits (81), Expect = 5e-39
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 413 ggtttgaagacaaacgcgccgaggatggagttcctgatcgccgtcttccttaccagcgtt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggtttgaagacaaacgcgccgaggatggagttcctgatcgccgtcttccttaccagcgtt 297
Query: 473 ccactgccgaagaaactgcgt 493
|||||||||||||||||||||
Sbjct: 296 ccactgccgaagaaactgcgt 276