Miyakogusa Predicted Gene
- Lj0g3v0337609.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0337609.1 tr|Q0E2Y2|Q0E2Y2_ORYSJ Os02g0204300 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os02g02043,49.79,2e-18,seg,NULL,CUFF.23334.1
(1989 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP066191 similar to UniRef100_Q8RWY7 Cluster: Peptidyl-... 860 0.0
gnl|LJGI|TC69977 similar to UniRef100_A5AQE5 Cluster: Peptidyl-p... 339 4e-92
gnl|LJGI|BP067470 weakly similar to UniRef100_Q23120 Cluster: Pr... 163 5e-39
gnl|LJGI|TC65592 similar to UniRef100_A5AQE5 Cluster: Peptidyl-p... 62 1e-08
>gnl|LJGI|BP066191 similar to UniRef100_Q8RWY7 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Arabidopsis thaliana|Rep: Peptidyl-prolyl
cis-trans isomerase - Arabidopsis thaliana (Mouse-ear
cress), partial (12%)
Length = 518
Score = 860 bits (434), Expect = 0.0
Identities = 461/470 (98%)
Strand = Plus / Minus
Query: 802 cgaagcatcagcagaagcccagtaaggggcgggaaggggaaaagtattagtagaagccct 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cgaagcatcagcagaagcccagtaaggggcgggaaggggaaaagtattagtagaagccct 459
Query: 862 gtgagaactcgttctcgtagaagtgtcagtgcgagtcctgtaaggtccctttctcgaagc 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gtgagaactcgttctcgtagaagtgtcagtgcgagtcctgtaaggtccctttctcgaagc 399
Query: 922 cgccggagcaggagttctcccagagcatcatctcgaaaaacaatcagcagaagccctgta 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cgccggagcaggagttctcccagagcatcatctcgaaaaacaatcagcagaagccctgta 339
Query: 982 agagtctcaaggaagagtgtaagccgcagtcctgtgagatcaaatgcaagaagcttaagc 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agagtctcaaggaagagtgtaagccgcagtcctgtgagatcaaatgcaagaagcttaagc 279
Query: 1042 agaagctctggcagggtcccctctaagagaagcattagccgtagtccagttagatcacct 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agaagctctggcagggtcccctctaagagaagcattagccgtagtccagttagatcacct 219
Query: 1102 gaaagaaccttaagcagaagcactggtagggtcccctcaaagagaagcattagccgtagt 1161
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 218 gaaagaaccttaagcagaagcactggtagggtcctctcaaagagaagcatcagccgtagt 159
Query: 1162 ccagttagatcacctgaaagaaccttaagcagaagcactggtagggtcccctcaaagaga 1221
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 158 ccagttagatcacctgcaagaagcttaagcagaagcactggtagggtcccctcaaagaga 99
Query: 1222 agcattagccgtagtccagttagatcacctgaaagaaccttaagcagaag 1271
||||||||||||||||||||||||||||| | ||||| | | ||||||||
Sbjct: 98 agcattagccgtagtccagttagatcaccagcaagaagcattagcagaag 49
Score = 523 bits (264), Expect = e-147
Identities = 306/319 (95%), Gaps = 2/319 (0%)
Strand = Plus / Minus
Query: 1153 agccgtagtccagttagatcacctgaaagaaccttaagcagaagcactggtagggtcccc 1212
||||| ||||| || |||||| || ||||| ||||||||||||| |||| |||||||||
Sbjct: 317 agccgcagtcctgtgagatcaaatgcaagaagcttaagcagaagctctggcagggtcccc 258
Query: 1213 tcaaagagaagcattagccgtagtccagttagatcacctgaaagaaccttaagcagaagc 1272
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctaagagaagcattagccgtagtccagttagatcacctgaaagaaccttaagcagaagc 198
Query: 1273 actggtagggtcctctcaaagagaagcatcagccgtagtccagttagatcacctgcaaga 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 actggtagggtcctctcaaagagaagcatcagccgtagtccagttagatcacctgcaaga 138
Query: 1333 agcttaagcagaagcactggtagggtcccctcaaagagaagcattagccgtagtccagtt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agcttaagcagaagcactggtagggtcccctcaaagagaagcattagccgtagtccagtt 78
Query: 1393 agatcaccagcaagaagcattagcagaagtcctgtcagagcaccaagtagaagcattagc 1452
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 77 agatcaccagcaagaagcattagcagaagtcctgtcagagcaccaagtagaagcat--ac 20
Query: 1453 agaagtcctgtcagagcac 1471
|||||||||||||||||||
Sbjct: 19 agaagtcctgtcagagcac 1
Score = 383 bits (193), Expect = e-105
Identities = 250/269 (92%)
Strand = Plus / Minus
Query: 1078 agccgtagtccagttagatcacctgaaagaaccttaagcagaagcactggtagggtcccc 1137
||||| ||||| || |||||| || ||||| ||||||||||||| |||| |||||||||
Sbjct: 317 agccgcagtcctgtgagatcaaatgcaagaagcttaagcagaagctctggcagggtcccc 258
Query: 1138 tcaaagagaagcattagccgtagtccagttagatcacctgaaagaaccttaagcagaagc 1197
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctaagagaagcattagccgtagtccagttagatcacctgaaagaaccttaagcagaagc 198
Query: 1198 actggtagggtcccctcaaagagaagcattagccgtagtccagttagatcacctgaaaga 1257
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 197 actggtagggtcctctcaaagagaagcatcagccgtagtccagttagatcacctgcaaga 138
Query: 1258 accttaagcagaagcactggtagggtcctctcaaagagaagcatcagccgtagtccagtt 1317
| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 137 agcttaagcagaagcactggtagggtcccctcaaagagaagcattagccgtagtccagtt 78
Query: 1318 agatcacctgcaagaagcttaagcagaag 1346
|||||||| ||||||||| | ||||||||
Sbjct: 77 agatcaccagcaagaagcattagcagaag 49
Score = 85.7 bits (43), Expect = 1e-15
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 1405 agaagcattagcagaagtcctgtcagagcaccaagtagaagcattagcagaagtcctgtc 1464
|||||||||||| | ||||| || ||| ||||| ||||||||||||||||||||||||
Sbjct: 101 agaagcattagccgtagtccagttagatcaccagcaagaagcattagcagaagtcctgtc 42
Query: 1465 agagcaccaagtaga 1479
|||||||||||||||
Sbjct: 41 agagcaccaagtaga 27
>gnl|LJGI|TC69977 similar to UniRef100_A5AQE5 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(9%)
Length = 690
Score = 339 bits (171), Expect = 4e-92
Identities = 180/183 (98%)
Strand = Plus / Plus
Query: 1807 tcaccaagcccacggtaccgagctcgacgatatagtcggtcccgtagcccagttcgcagt 1866
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1 tcaccaagcccacggtaccgagcttgacgatatagtcggtcccgtagcccagttcacagt 60
Query: 1867 ccttccccagttcgtcgctctcctcgtgtggagaagcgtgcgtcatactcccggagcagg 1926
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccttccccagtttgtcgctctcctcgtgtggagaagcgtgcgtcatactcccggagcagg 120
Query: 1927 agtccatcaaaatccaggtcttctgtggaatcacaatctccacgtaaagcaagtagagac 1986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtccatcaaaatccaggtcttctgtggaatcacaatctccacgtaaagcaagtagagac 180
Query: 1987 agg 1989
|||
Sbjct: 181 agg 183
>gnl|LJGI|BP067470 weakly similar to UniRef100_Q23120 Cluster: Probable splicing factor
arginine/serine-rich 2; n=1; Caenorhabditis elegans|Rep:,
partial (8%)
Length = 120
Score = 163 bits (82), Expect = 5e-39
Identities = 114/122 (93%), Gaps = 2/122 (1%)
Strand = Plus / Plus
Query: 1520 gtagagcaaggacgcctcgtcggaggagtttgtcgaggagtgtttcacctgatgcttcac 1579
|||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 1 gtagagcaagga-gcctcgtcggaggagtcggtcgaggagtgttacacctgatgcttcac 59
Query: 1580 caaagcgaatcagaaggggaagaggtttcagcgaacgatactcgtatgcaagaaggtatc 1639
|||||||| |||||||||||| ||| ||||||||||||||||||||||| ||||||||||
Sbjct: 60 caaagcgactcagaaggggaacagg-ttcagcgaacgatactcgtatgcgagaaggtatc 118
Query: 1640 ga 1641
||
Sbjct: 119 ga 120
>gnl|LJGI|TC65592 similar to UniRef100_A5AQE5 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(29%)
Length = 719
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1 atgcggaagaaaggaaagcacaaaaaatctccaaaagacagaa 43
||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 677 atgcggaggaagggaaagcacaaaaaatcttcaaaagacagaa 719