Miyakogusa Predicted Gene
- Lj0g3v0337359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0337359.1 tr|Q32PR4|Q32PR4_DANRE Zgc:123303 OS=Danio rerio
GN=arfgap2 PE=2 SV=1,42.2,0.0000000002,ArfGap,Arf GTPase activating
protein; seg,NULL; ArfGap/RecO-like zinc finger,NULL; Putative GTP-ase
,CUFF.23069.1
(1212 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68931 similar to UniRef100_A7PC88 Cluster: Chromosome... 2387 0.0
gnl|LJGI|TC59845 similar to UniRef100_A7PC88 Cluster: Chromosome... 605 e-172
gnl|LJGI|TC76362 similar to UniRef100_A7PC88 Cluster: Chromosome... 343 2e-93
gnl|LJGI|BP040818 similar to UniRef100_A7PC88 Cluster: Chromosom... 208 6e-53
gnl|LJGI|TC65624 similar to UniRef100_A7PC88 Cluster: Chromosome... 200 1e-50
gnl|LJGI|FS360760 similar to UniRef100_A7PC88 Cluster: Chromosom... 135 7e-31
gnl|LJGI|TC82045 similar to UniRef100_A7PC88 Cluster: Chromosome... 80 4e-14
>gnl|LJGI|TC68931 similar to UniRef100_A7PC88 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1639
Score = 2387 bits (1204), Expect = 0.0
Identities = 1211/1212 (99%), Gaps = 1/1212 (0%)
Strand = Plus / Plus
Query: 1 atggcgtctgaaggcttcaccgacaagaatgttgtgttcaagaaactcaagacgaagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atggcgtctgaaggcttcaccgacaagaatgttgtgttcaagaaactcaagacgaagtct 254
Query: 61 gaaaataagatgtgtttcgattgcaatgcgaagaactcaacctgggcgtccgtcacttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaaaataagatgtgtttcgattgcaatgcgaagaactcaacctgggcgtccgtcacttat 314
Query: 121 gggatcttcctctgcatcgattgctccgcggttcatcgtggtctcggcgttcacatcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gggatcttcctctgcatcgattgctccgcggttcatcgtggtctcggcgttcacatcagc 374
Query: 181 ttcgtgagatctacaaatttagactcatggagtcctgagcaattgaaaacaatgagcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttcgtgagatctacaaatttagactcatggagtcctgagcaattgaaaacaatgagcttt 434
Query: 241 ggaggaaacggtcgtgcgcaggttttctttaagcaacatggttggactgacggtggcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggaggaaacggtcgtgcgcaggttttctttaagcaacatggttggactgacggtggcaaa 494
Query: 301 atagaagcgaagtatacatccagagctgcagaattgtataggcaaattctttcaaaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atagaagcgaagtatacatccagagctgcagaattgtataggcaaattctttcaaaggaa 554
Query: 361 gtagctaaaagtatggctgaggaggcaagcttgctttcatcgcctgttgcttctcagtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtagctaaaagtatggctgaggaggcaagcttgctttcatcgcctgttgcttctcagtct 614
Query: 421 gcccaaggggttaatggacttgctgatgttaagaccaatgaatcaccgaaagaaaacact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gcccaaggggttaatggacttgctgatgttaagaccaatgaatcaccgaaagaaaacact 674
Query: 481 ttggagaagccagaaaagcctgagagtacttcttcacctagagcacacacagcggtatca 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ttggagaagccagaaa-gcctgagagtacttcttcacctagagcacacacagcggtatca 733
Query: 541 aatactatgaagaagcctattggggctaaaaaagctgggaagagtggggggcttggtgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 aatactatgaagaagcctattggggctaaaaaagctgggaagagtggggggcttggtgcc 793
Query: 601 cgtaagctcactaaaaagccaagtgagtctctctatgagcagaaacctgaagaaccacct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 cgtaagctcactaaaaagccaagtgagtctctctatgagcagaaacctgaagaaccacct 853
Query: 661 gctccgatcccatccaccacaaacaacaatttatctgctgtgccatctctgacgtctcga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gctccgatcccatccaccacaaacaacaatttatctgctgtgccatctctgacgtctcga 913
Query: 721 tttgagtatgttgaaaatgtccagtcatccgagttgaattctggaggttcaaatgcaata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tttgagtatgttgaaaatgtccagtcatccgagttgaattctggaggttcaaatgcaata 973
Query: 781 agtcatgtttctgcaccaaaggtatcaagcttcttttcagactttggaatggatagtggc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 agtcatgtttctgcaccaaaggtatcaagcttcttttcagactttggaatggatagtggc 1033
Query: 841 tttcagaagaaatctgggccaagctcttcaaaagtgcaaattcaggaatctgatgaagca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 tttcagaagaaatctgggccaagctcttcaaaagtgcaaattcaggaatctgatgaagca 1093
Query: 901 agaaaaaagttctcaaatgctaaatctatttcgtcatcccaattttttggagatcagagc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 agaaaaaagttctcaaatgctaaatctatttcgtcatcccaattttttggagatcagagc 1153
Query: 961 aaggcagatgttgaagctaaagctactttatcgaagttttctggttcgaatgccatctcc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 aaggcagatgttgaagctaaagctactttatcgaagttttctggttcgaatgccatctcc 1213
Query: 1021 agcgctgatctttttggtgactctggcgataactccattgatctttctgctagcgacctc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 agcgctgatctttttggtgactctggcgataactccattgatctttctgctagcgacctc 1273
Query: 1081 atcaatcgattatctttccaggcacaacaggatatctcttcccttaagaacattgcagga 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 atcaatcgattatctttccaggcacaacaggatatctcttcccttaagaacattgcagga 1333
Query: 1141 gagactgggaagaagctcagctcattggcctctaccttgatgactgattttggagaccga 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 gagactgggaagaagctcagctcattggcctctaccttgatgactgattttggagaccga 1393
Query: 1201 atcctctgaaat 1212
||||||||||||
Sbjct: 1394 atcctctgaaat 1405
>gnl|LJGI|TC59845 similar to UniRef100_A7PC88 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 909
Score = 605 bits (305), Expect = e-172
Identities = 595/691 (86%), Gaps = 3/691 (0%)
Strand = Plus / Plus
Query: 1 atggcgtctgaaggcttcaccgacaagaatgttgtgttcaagaaactcaagacgaagtct 60
|||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 193 atggcgtctgaaggtttcaccgacaagaacactgtgttcaggaaactcaaggcgaagtct 252
Query: 61 gaaaataagatgtgtttcgattgcaatgcgaagaactcaacctgggcgtccgtcacttat 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 253 gaaaataagatgtgtttcgattgcaatgcgaagaacccaacctgggcgtccgtcacgtat 312
Query: 121 gggatcttcctctgcatcgattgctccgcggttcatcgtggtctcggcgttcacatcagc 180
|||||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||
Sbjct: 313 gggatcttcctctgcatcgattgctctgccgttcatcgcagtctcggcgttcatatcagc 372
Query: 181 ttcgtgagatctacaaatttagactcatggagtcctgagcaattgaaaacaatgagcttt 240
||||||||||||||||||||||| |||||||||||||||||| | |||| |||||||||
Sbjct: 373 ttcgtgagatctacaaatttagattcatggagtcctgagcaactaaaaatgatgagcttt 432
Query: 241 ggaggaaacggtcgtgcgcaggttttctttaagcaacatggttggactgacggtggcaaa 300
|||||||| ||||| |||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 433 ggaggaaataaccgtgctcaggctttctttaagcaacatggttggaccgacggtggtaaa 492
Query: 301 atagaagcgaagtatacatccagagctgcagaattgtataggcaaattctttcaaaggaa 360
|||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 493 atagaagccaagtacacatccagagctgcagagttgtataagcaaattctttcaaaagaa 552
Query: 361 gtagctaaaagtatggctgaggaggcaagcttgctttcatcgcctgttgcttctcagtct 420
||||| |||||||||||||||| ||| ||||||| |||||| ||| | |||||||||||
Sbjct: 553 gtagccaaaagtatggctgaggtggctagcttgccttcatcaactgctccttctcagtct 612
Query: 421 gcccaaggggttaatggacttgctgatgttaagaccaatgaatcaccgaaagaaaacact 480
| ||||||| ||||| |||| |||||| | |||||||||| | |||| |||||| |
Sbjct: 613 ggtcaaggggctaatgcactttctgatgccaggaccaatgaagtaatgaaaaaaaacatt 672
Query: 481 ttggagaagccagaaaagcctgagagtacttcttcacctaga---gcacacacagcggta 537
||||||| |||||||||| ||| || ||||| |||||| || |||| ||| |
Sbjct: 673 ctggagaatccagaaaagcttgaaagcacttcgtcacctcgaattgcacgttcagtaatt 732
Query: 538 tcaaatactatgaagaagcctattggggctaaaaaagctgggaagagtggggggcttggt 597
|||| |||| ||| |||||||| ||| | ||||| ||||||| | ||||| ||||||
Sbjct: 733 tcaagtactgtgagaaagcctatcgggacaaaaaagactgggaaaggcgggggacttggt 792
Query: 598 gcccgtaagctcactaaaaagccaagtgagtctctctatgagcagaaacctgaagaacca 657
|||| ||||| |||| |||||||||||| |||||||| |||||||| |||||||| |||
Sbjct: 793 gcccaaaagctaactagaaagccaagtgaatctctctacgagcagaagcctgaagagcca 852
Query: 658 cctgctccgatcccatccaccacaaacaaca 688
||||||||| | ||||| | ||||||||||
Sbjct: 853 cctgctccggttgcatcctcaacaaacaaca 883
>gnl|LJGI|TC76362 similar to UniRef100_A7PC88 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 644
Score = 343 bits (173), Expect = 2e-93
Identities = 412/491 (83%), Gaps = 3/491 (0%)
Strand = Plus / Plus
Query: 725 agtatgttgaaaatgtccagtcatccgagttgaattctggaggttcaaatgcaataagtc 784
||||||| |||||||| || |||||||||||| |||||||| ||||| ||| ||||||||
Sbjct: 1 agtatgtagaaaatgttcaatcatccgagttgtattctggaagttcagatgtaataagtc 60
Query: 785 atgtttctgcaccaaaggtatcaagcttcttttcagactttggaatggatagtggctttc 844
|||| |||| ||||||| ||||||||||||| |||||||||||||||| |||||||||
Sbjct: 61 atgtgtctgtaccaaagtcatcaagcttctttggagactttggaatggatggtggctttc 120
Query: 845 agaagaaatctgggccaagctcttcaaaagtgcaaattcaggaatctgatgaagcaagaa 904
|| || |||||| |||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 121 caaaaaagtctgggtcaagttcctcaaaagttgaaattcaggaatctgatgaagcaagaa 180
Query: 905 aaaagttctcaaatgctaaatctatttcgtcatcccaattttttggagatcagagcaagg 964
| ||||||||||||||||||||||| || |||||||||||||||||||| | | |
Sbjct: 181 agaagttctcaaatgctaaatctatatcttcatcccaattttttggagacaataaggctg 240
Query: 965 cagatgttgaagctaaagctactttatcgaagttttctggttcgaatgccatctccagcg 1024
||||||| ||||| ||||||||| || |||||||| |||||||||||||||||||| |
Sbjct: 241 cagatgtggaagcgcgagctactttgtcaaagttttcaggttcgaatgccatctccagtg 300
Query: 1025 ctgatcttttt---ggtgactctggcgataactccattgatctttctgctagcgacctca 1081
||||||| ||| || ||||| || || |||||||||||| |||||| || ||
Sbjct: 301 ctgatctatttggaggcgactcaggagactcttccattgatcttgctgctaacgttctgc 360
Query: 1082 tcaatcgattatctttccaggcacaacaggatatctcttcccttaagaacattgcaggag 1141
||||| ||||||||||||||| ||| ||||| |||| ||||| ||||||||||||||||
Sbjct: 361 tcaatagattatctttccaggtgcaagaggatctctcatccctcaagaacattgcaggag 420
Query: 1142 agactgggaagaagctcagctcattggcctctaccttgatgactgattttggagaccgaa 1201
| |||||||||||||| | ||| |||||||| ||||| ||| | |||||| ||||| |
Sbjct: 421 aaactgggaagaagcttacctccttggcctccaccttaatgtcagattttcaggaccgga 480
Query: 1202 tcctctgaaat 1212
|||||| ||||
Sbjct: 481 tcctctaaaat 491
>gnl|LJGI|BP040818 similar to UniRef100_A7PC88 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 468
Score = 208 bits (105), Expect = 6e-53
Identities = 105/105 (100%)
Strand = Plus / Minus
Query: 1108 caggatatctcttcccttaagaacattgcaggagagactgggaagaagctcagctcattg 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 caggatatctcttcccttaagaacattgcaggagagactgggaagaagctcagctcattg 409
Query: 1168 gcctctaccttgatgactgattttggagaccgaatcctctgaaat 1212
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gcctctaccttgatgactgattttggagaccgaatcctctgaaat 364
>gnl|LJGI|TC65624 similar to UniRef100_A7PC88 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 630
Score = 200 bits (101), Expect = 1e-50
Identities = 158/177 (89%)
Strand = Plus / Plus
Query: 777 aataagtcatgtttctgcaccaaaggtatcaagcttcttttcagactttggaatggatag 836
|||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||| |
Sbjct: 4 aataagtcatgtgtctgtaccaaagtcatcaagcttctttggagactttggaatggatgg 63
Query: 837 tggctttcagaagaaatctgggccaagctcttcaaaagtgcaaattcaggaatctgatga 896
|||||||| || || |||||| |||| || |||||||| |||||||||||||||||||
Sbjct: 64 tggctttccaaaaaagtctgggtcaagttcctcaaaagttgaaattcaggaatctgatga 123
Query: 897 agcaagaaaaaagttctcaaatgctaaatctatttcgtcatcccaattttttggaga 953
||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 124 agcaagaaagaagttctcaaatgctaaatctatatcttcatcccaattttttggaga 180
Score = 117 bits (59), Expect = 2e-25
Identities = 175/213 (82%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 1003 ggttcgaatgccatctccagcgctgatctttttggtg---actctggcgataactccatt 1059
|||||||||||||||||||| |||||||| ||||| | |||| || || ||||||
Sbjct: 254 ggttcgaatgccatctccagtgctgatctatttggaggcgactcaggagactcttccatt 313
Query: 1060 gatctttctgctagcgacctcatcaatcgattatctttccaggcacaacaggatatctct 1119
|||||| |||||| || || ||||| ||||||||||||||| ||| ||||| ||||
Sbjct: 314 gatcttgctgctaacgttctgctcaatagattatctttccaggtgcaagaggatctctca 373
Query: 1120 tcccttaagaacattgcaggagagactgggaagaagctcagctcattggcctctaccttg 1179
||||| ||||||||||||||||| |||||||||||||| | ||| |||||||| |||||
Sbjct: 374 tccctcaagaacattgcaggagaaactgggaagaagcttacctccttggcctccacctta 433
Query: 1180 atgactgattttggagaccgaatcctctgaaat 1212
||| | |||||| ||||| ||||||| ||||
Sbjct: 434 atgtcagattttcaggaccggatcctctaaaat 466
>gnl|LJGI|FS360760 similar to UniRef100_A7PC88 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 619
Score = 135 bits (68), Expect = 7e-31
Identities = 131/152 (86%)
Strand = Plus / Minus
Query: 724 gagtatgttgaaaatgtccagtcatccgagttgaattctggaggttcaaatgcaataagt 783
|||||||| |||||||| || |||||||||||| |||||||| ||||| ||| |||||||
Sbjct: 613 gagtatgtagaaaatgttcaatcatccgagttgtattctggaagttcagatgtaataagt 554
Query: 784 catgtttctgcaccaaaggtatcaagcttcttttcagactttggaatggatagtggcttt 843
||||| |||| ||||||| ||||||||||||| |||||||||||||||| ||||||||
Sbjct: 553 catgtgtctgtaccaaagtcatcaagcttctttggagactttggaatggatggtggcttt 494
Query: 844 cagaagaaatctgggccaagctcttcaaaagt 875
| || || |||||| |||| || ||||||||
Sbjct: 493 ccaaaaaagtctgggtcaagttcctcaaaagt 462
Score = 117 bits (59), Expect = 2e-25
Identities = 175/213 (82%), Gaps = 3/213 (1%)
Strand = Plus / Minus
Query: 1003 ggttcgaatgccatctccagcgctgatctttttggtg---actctggcgataactccatt 1059
|||||||||||||||||||| |||||||| ||||| | |||| || || ||||||
Sbjct: 457 ggttcgaatgccatctccagtgctgatctatttggaggcgactcaggagactcttccatt 398
Query: 1060 gatctttctgctagcgacctcatcaatcgattatctttccaggcacaacaggatatctct 1119
|||||| |||||| || || ||||| ||||||||||||||| ||| ||||| ||||
Sbjct: 397 gatcttgctgctaacgttctgctcaatagattatctttccaggtgcaagaggatctctca 338
Query: 1120 tcccttaagaacattgcaggagagactgggaagaagctcagctcattggcctctaccttg 1179
||||| ||||||||||||||||| |||||||||||||| | ||| |||||||| |||||
Sbjct: 337 tccctcaagaacattgcaggagaaactgggaagaagcttacctccttggcctccacctta 278
Query: 1180 atgactgattttggagaccgaatcctctgaaat 1212
||| | |||||| ||||| ||||||| ||||
Sbjct: 277 atgtcagattttcaggaccggatcctctaaaat 245
>gnl|LJGI|TC82045 similar to UniRef100_A7PC88 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 550
Score = 79.8 bits (40), Expect = 4e-14
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 1109 aggatatctcttcccttaagaacattgcaggagagactgggaagaagctcagctcattgg 1168
||||| |||| ||||| ||||||||||||||||| |||||||||||||| | ||| ||||
Sbjct: 269 aggatctctcatccctcaagaacattgcaggagaaactgggaagaagcttacctccttgg 328
Query: 1169 cctctaccttgatgactgattttggagaccgaatcctctgaaat 1212
|||| ||||| ||| | |||||| ||||| ||||||| ||||
Sbjct: 329 cctccaccttaatgtcagattttcaggaccggatcctctaaaat 372