Miyakogusa Predicted Gene

Lj0g3v0337019.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0337019.1 Non Chatacterized Hit- tr|I1LV98|I1LV98_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.62,0,FAMILY NOT
NAMED,NULL; seg,NULL; PC-Esterase,PC-Esterase; PMR5N,PMR5 N-terminal
domain,CUFF.23034.1
         (1059 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO011809 similar to UniRef100_A7P274 Cluster: Chromosom...   141   1e-32
gnl|LJGI|TC77590 similar to UniRef100_A7PVY1 Cluster: Chromosome...    58   1e-07

>gnl|LJGI|GO011809 similar to UniRef100_A7P274 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (17%)
          Length = 540

 Score =  141 bits (71), Expect = 1e-32
 Identities = 182/219 (83%)
 Strand = Plus / Plus

                                                                        
Query: 841  ccttatcctggtgtggacattgtaaagagtgtcctcagaaacatggcaactccagttcaa 900
            ||||||||||||||||||||||| | ||| ||  | || ||||||  |||||||||| | 
Sbjct: 158  ccttatcctggtgtggacattgtgaggagcgttttgagcaacatgaaaactccagtttat 217

                                                                        
Query: 901  ttgctcgacattactttgctgacgcagctacggaaggatggtcacccttctatatacaca 960
            ||||| |||||||||||||   | |||||  |||  ||||| ||||||||| |||| |||
Sbjct: 218  ttgcttgacattactttgccttcacagctgaggatcgatggccacccttctgtatataca 277

                                                                        
Query: 961  ggccgtggcatttcttatcaggactgcagtcactggtgtcttgctggtgttcctgatact 1020
            || ||||||| ||||| | | || ||||||||||||||||||||||||||||||||||| 
Sbjct: 278  ggacgtggcacttcttttgaagattgcagtcactggtgtcttgctggtgttcctgataca 337

                                                   
Query: 1021 tggaatcaaatattgtattctgcacatcttggaaattag 1059
            |||||| |||| |||||| ||||    ||||||||||||
Sbjct: 338  tggaatgaaatcttgtatgctgctttgcttggaaattag 376


>gnl|LJGI|TC77590 similar to UniRef100_A7PVY1 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (50%)
          Length = 1549

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 982  gactgcagtcactggtgtcttgctggtgttcctgatacttggaat 1026
            ||||||||||||||||| ||| |||||||||||||| | ||||||
Sbjct: 928  gactgcagtcactggtgccttcctggtgttcctgatgcgtggaat 972