Miyakogusa Predicted Gene
- Lj0g3v0337019.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0337019.1 Non Chatacterized Hit- tr|I1LV98|I1LV98_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.62,0,FAMILY NOT
NAMED,NULL; seg,NULL; PC-Esterase,PC-Esterase; PMR5N,PMR5 N-terminal
domain,CUFF.23034.1
(1059 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011809 similar to UniRef100_A7P274 Cluster: Chromosom... 141 1e-32
gnl|LJGI|TC77590 similar to UniRef100_A7PVY1 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|GO011809 similar to UniRef100_A7P274 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 540
Score = 141 bits (71), Expect = 1e-32
Identities = 182/219 (83%)
Strand = Plus / Plus
Query: 841 ccttatcctggtgtggacattgtaaagagtgtcctcagaaacatggcaactccagttcaa 900
||||||||||||||||||||||| | ||| || | || |||||| |||||||||| |
Sbjct: 158 ccttatcctggtgtggacattgtgaggagcgttttgagcaacatgaaaactccagtttat 217
Query: 901 ttgctcgacattactttgctgacgcagctacggaaggatggtcacccttctatatacaca 960
||||| ||||||||||||| | ||||| ||| ||||| ||||||||| |||| |||
Sbjct: 218 ttgcttgacattactttgccttcacagctgaggatcgatggccacccttctgtatataca 277
Query: 961 ggccgtggcatttcttatcaggactgcagtcactggtgtcttgctggtgttcctgatact 1020
|| ||||||| ||||| | | || |||||||||||||||||||||||||||||||||||
Sbjct: 278 ggacgtggcacttcttttgaagattgcagtcactggtgtcttgctggtgttcctgataca 337
Query: 1021 tggaatcaaatattgtattctgcacatcttggaaattag 1059
|||||| |||| |||||| |||| ||||||||||||
Sbjct: 338 tggaatgaaatcttgtatgctgctttgcttggaaattag 376
>gnl|LJGI|TC77590 similar to UniRef100_A7PVY1 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1549
Score = 58.0 bits (29), Expect = 1e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 982 gactgcagtcactggtgtcttgctggtgttcctgatacttggaat 1026
||||||||||||||||| ||| |||||||||||||| | ||||||
Sbjct: 928 gactgcagtcactggtgccttcctggtgttcctgatgcgtggaat 972