Miyakogusa Predicted Gene
- Lj0g3v0336539.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0336539.1 Non Chatacterized Hit- tr|I1P507|I1P507_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,28.32,3e-18,seg,NULL; GLR3409 PROTEIN,NULL; ATP-DEPENDENT CLP
PROTEASE,NULL; AAA_2,ATPase, AAA-2; P-loop contain,CUFF.23005.1
(1521 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS348230 weakly similar to UniRef100_A7NYE4 Cluster: Ch... 1074 0.0
gnl|LJGI|TC73723 weakly similar to UniRef100_A7NYE4 Cluster: Chr... 153 4e-36
>gnl|LJGI|FS348230 weakly similar to UniRef100_A7NYE4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 707
Score = 1074 bits (542), Expect = 0.0
Identities = 551/554 (99%)
Strand = Plus / Minus
Query: 968 ataaaagaaagcaggttgatagtagtgactccatagtgggaacaacatgcaagatgcaga 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ataaaagaaagcaggttgatagtagtgactccatagtgggaacaacatgcaagatgcaga 648
Query: 1028 aacaggtcagcgagacgtcaagaacccatctggatctaaacatgcccctagaggagggtg 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aacaggtcagcgagacgtcaagaacccatctggatctaaacatgcccctagaggagggtg 588
Query: 1088 aagagggtatcaatgacagtgtcagtgactatgaaaatgaatctagagcagaaaatgcag 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aagagggtatcaatgacagtgtcagtgactatgaaaatgaatctagagcagaaaatgcag 528
Query: 1148 acgccgcgtggttaagtgatttctgtaatcaagttgatgaaaaagtggattttaagccat 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 acgccgcgtggttaagtgatttctgtaatcaagttgatgaaaaagtggattttaagccat 468
Query: 1208 tcaattttgatgtgcttgctgaacaaatgttgaaaagcattagcatacaatttcaaagga 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tcaattttgatgtgcttgctgaacaaatgttgaaaagcattagcatacaatttcaaagga 408
Query: 1268 catttggttctgagtttcagctggaaattgattatgaggtaatggcacagatactcgcag 1327
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 catttggttttgagtttcagctggaaattgattatgaggtaatggcacagatactcgcag 348
Query: 1328 ctgcttggttagcagagaagaaaaatgctgcggaggattgggttgaatatgttcttggca 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ctgcttggttagcagagaagaaaaatgctgcggaggattgggttgaatatgttcttggca 288
Query: 1388 aatgctttgttgaagctaagcagaaaacccaccctgcagctcaatctgtcttcaaactgg 1447
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 287 aatgctttgttgaagctaagcagaaaaccccccctgcagctcaatctgttttcaaactgg 228
Query: 1448 ttagttgtgaatccatttttgtggaagagcaagctcctggagtatgccttacagctagag 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ttagttgtgaatccatttttgtggaagagcaagctcctggagtatgccttacagctagag 168
Query: 1508 ttaacctgaactaa 1521
||||||||||||||
Sbjct: 167 ttaacctgaactaa 154
>gnl|LJGI|TC73723 weakly similar to UniRef100_A7NYE4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 736
Score = 153 bits (77), Expect = 4e-36
Identities = 294/366 (80%), Gaps = 9/366 (2%)
Strand = Plus / Plus
Query: 1156 tggttaagtgatttctgtaatcaagttgatgaaaaagtggattttaagccattcaatttt 1215
|||||||||||||||||| ||||| |||||| | |||||| |||||||||||||||||||
Sbjct: 193 tggttaagtgatttctgtgatcaaattgatggagaagtggtttttaagccattcaatttt 252
Query: 1216 gatgtgcttgctgaacaaatgttgaaaagcattagcatacaatttcaaaggacatttggt 1275
||| ||||| || ||| | | || | || | || ||||||||||||||||||
Sbjct: 253 gattcccttgccgagcaagtaatagaatgtgttgagacacgatttcaaaggacatttgga 312
Query: 1276 tctgagtttcagctggaaattgattatgaggtaatggcacagatactcgcagctgcttgg 1335
|| ||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 313 tcagagtttctactggaaattgattatgaggtcatggcacagatacttgcagctgcatgg 372
Query: 1336 ttagcagagaagaaaaatgctgcggaggattgggttgaatatgttcttggcaaatgcttt 1395
||| | || |||||||| ||| |||||||||| |||| ||||| |||| | | |||||
Sbjct: 373 ttatcggacaagaaaaaatctgtggaggattggattgagcatgttgttggaagaagcttt 432
Query: 1396 gttgaagctaagcagaa-aac--------ccaccctgcagctcaatctgtcttcaaactg 1446
| || || |||||| || ||||||||||||| ||| |||| | ||||||
Sbjct: 433 gccgaggcgcggcagaagtaccatcaccaccaccctgcagctgaatatgtcatgaaactg 492
Query: 1447 gttagttgtgaatccatttttgtggaagagcaagctcctggagtatgccttacagctaga 1506
|||| |||||| ||||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct: 493 gttaactgtgaaagcatttttgtggaagagcaagctctaggagtgtgccttccagctaga 552
Query: 1507 gttaac 1512
|||||
Sbjct: 553 attaac 558