Miyakogusa Predicted Gene
- Lj0g3v0336439.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0336439.1 tr|G7II27|G7II27_MEDTR F-box domain containing
protein OS=Medicago truncatula GN=MTR_2g101940 PE=4
S,74.29,0.0000008,seg,NULL; FAMILY NOT NAMED,NULL; F-box domain,F-box
domain, cyclin-like; RNI-like,NULL; no descripti,CUFF.22992.1
(1122 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 1003 0.0
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 216 2e-55
gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cy... 155 7e-37
gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 129 4e-29
gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 117 2e-25
gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 98 1e-19
gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cy... 90 4e-17
gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 74 2e-12
gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 68 1e-10
gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cy... 56 5e-07
>gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 1467
Score = 1003 bits (506), Expect = 0.0
Identities = 854/972 (87%), Gaps = 16/972 (1%)
Strand = Plus / Plus
Query: 51 tgaagagaacaaagaccggctcagtgacttatcggattgcattctccttcacattttatc 110
||||||||| |||||| |||| ||||||||| | ||||| || |||||| ||||||||||
Sbjct: 217 tgaagagaataaagacaggcttagtgacttacctgattgtatactcctttacattttatc 276
Query: 111 atttgtgaaagccaaacatgcagtccaaacatgtgtgttatccacaagatggaaggatct 170
|||||||||||||||||| | |||||||||||| || ||||||| |||||||||||||||
Sbjct: 277 atttgtgaaagccaaacacgtagtccaaacatgcgtattatccaaaagatggaaggatct 336
Query: 171 ctggaaatatctcccaacccttattttacattccctagacttttccagtttgccgagctt 230
|||||| |||||||||||||||||||||||||||| |||||| || ||||| |||||||
Sbjct: 337 ttggaaacatctcccaacccttattttacattcccttgactttacccgtttgtcgagctt 396
Query: 231 ca-------ccaaattcgtctctcggcttctgactattcgcgatggctcaaccgtgctgc 283
|| |||||||||| ||||| ||||||||| |||||||| ||||||||| |||||
Sbjct: 397 caagcttcaccaaattcgtgtctcgccttctgactcttcgcgatcgctcaaccgcgctgc 456
Query: 284 aaggtctagattttgagcatcttggttgggttcaacctaacctcctcaaaaggattgtaa 343
| |||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||
Sbjct: 457 acggtctagattttgagcgtcttggttgtattcagcctcacctcctcaaaaggattgtaa 516
Query: 344 aatatgctgttttacacaatatccagcgattaggattgattgtcacaacctctgatattg 403
| ||||| |||| ||||||| | |||||||||||||||| ||||||||| |||||||||
Sbjct: 517 agtatgccgtttcacacaatgtgcagcgattaggattgactgtcacaacatctgatattt 576
Query: 404 aacatattccgaattgcattttttcatctcagactttgacatctctcaagctcctatctt 463
|||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| || |||
Sbjct: 577 aacactttccgtattgcattttttcatctaagactctgacatctcttaagctcatagctt 636
Query: 464 acggttacactaa---------gagaacattatttccgaagtctcttaatttaccagcat 514
|| |||||||||| |||||||||||||||||| ||||||| ||| ||||||
Sbjct: 637 accgttacactaaaggaaataagagaacattatttccgaaatctcttagtttgccagcac 696
Query: 515 taactaccttgcatctagtgaatttcgacttctgtgtaaatgacgatggtgttgttgctg 574
|||||||||||||| |||||||||| ||||| |||| |||||| ||||| |||||||||
Sbjct: 697 taactaccttgcatttagtgaattttgacttttgtgcaaatgatgatggcattgttgctg 756
Query: 575 aacccttttcagttttaaataggttaaatagtttgatcattgaaaattgtaaccttagtg 634
| |||||||||||||||| | ||| |||||||||||||||||||| |||||||| ||||
Sbjct: 757 agcccttttcagttttaaccaagttgaatagtttgatcattgaaaactgtaacctaagtg 816
Query: 635 gtgctgcatatatcctatgcatatcaagtaagacgctgaccaatttgaccgtgcttcacc 694
||||||| | ||||| ||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 817 gtgctgccaagatcctctgcatatcaagtaagacactgaccaatttgactgtgcttcacc 876
Query: 695 cttgtcagtactacaaagtgtatttcttttctccaagtcttcgtacctttgcctttacgg 754
|||||| |||||| ||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct: 877 gttgtcattactaccaagtgcacttctcttctccaagtcttcgtacctttgcctttacgg 936
Query: 755 gtactccttttgagactctgtgtgggataaatatatcttccattgaacatgtaaattttg 814
| ||||||||||||||| | ||||| | |||||| ||||||||||| |||||||||||||
Sbjct: 937 gcactccttttgagactatctgtggaagaaatatttcttccattgagcatgtaaattttg 996
Query: 815 atatacattggtggtgtgcagagtattcttttattcttctcagttggctggtaaacctta 874
||||||||||| ||||| | |||||||||||||||| || || ||||||||| ||||||
Sbjct: 997 atatacattggaagtgtgaaaagtattcttttattctacttagctggctggtagacctta 1056
Query: 875 ccaatataaaatcattgacggtttccacaagtactcttcaggttctcttttcaattcctt 934
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 1057 ccaatataaaatcattgacggtttccacaagtactcttcaggttctcatctcaattcctc 1116
Query: 935 atttgtgggagtttaagtctcctatcttaggtagcttgaagtcattgaaaattaaactga 994
|||||| |||| ||||| ||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 1117 atttgttagagtataagtatcctatcttgggtagcttgaagtcattgaaagttaaactga 1176
Query: 995 gagaagacaagt 1006
||| ||||||||
Sbjct: 1177 gaggagacaagt 1188
Score = 81.8 bits (41), Expect = 9e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1062 agtggattatttgcttcaaaactcaccttctgcaaaggttgacatcataaggt 1114
|||||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1217 agtggactatttgcttcaaaactcaccctctgccaaggttgacatcataaggt 1269
>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 508
Score = 216 bits (109), Expect = 2e-55
Identities = 280/337 (83%)
Strand = Plus / Plus
Query: 45 tgaagatgaagagaacaaagaccggctcagtgacttatcggattgcattctccttcacat 104
|||| ||||||| |||||||| | ||||||||||| | ||||||||||||||||||||
Sbjct: 148 tgaaaatgaagataacaaagatagactcagtgacttgcctgattgcattctccttcacat 207
Query: 105 tttatcatttgtgaaagccaaacatgcagtccaaacatgtgtgttatccacaagatggaa 164
| |||||||||||||||||||| || || ||||| || | || ||||||||||||||
Sbjct: 208 tctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtccacaagatggaa 267
Query: 165 ggatctctggaaatatctcccaacccttattttacattccctagacttttccagtttgcc 224
||||||||||||| ||| || |||| || ||| ||| | |||||| | |
Sbjct: 268 ggatctctggaaacgtcttccttccctcatactactgtcctcaaacttttggacatataa 327
Query: 225 gagcttcaccaaattcgtctctcggcttctgactattcgcgatggctcaaccgtgctgca 284
|||||||||||||||||| ||||||||| ||||| ||||||||||||| |||| ||||||
Sbjct: 328 gagcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcgaccgcgctgca 387
Query: 285 aggtctagattttgagcatcttggttgggttcaacctaacctcctcaaaaggattgtaaa 344
|||||||||||||||||| |||| |||| ||| ||||||||||||||||||||||
Sbjct: 388 cggtctagattttgagcatgatggtcacattcagcctcacctcctcaaaaggattgtaaa 447
Query: 345 atatgctgttttacacaatatccagcgattaggattg 381
||||||||||| ||||||| |||| ||||||||||||
Sbjct: 448 atatgctgtttcacacaatgtccaacgattaggattg 484
>gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (24%)
Length = 859
Score = 155 bits (78), Expect = 7e-37
Identities = 165/194 (85%)
Strand = Plus / Plus
Query: 1 atgttgattccactgaatggaaatagtagaaggaaaagtgagagtgaagatgaagagaac 60
||||||||||| | ||||| || || ||||||| ||||||| |||| ||||||| |||
Sbjct: 114 atgttgattccgccgaatgcgaagagaggaaggaacagtgagaatgaaaatgaagacaac 173
Query: 61 aaagaccggctcagtgacttatcggattgcattctccttcacattttatcatttgtgaaa 120
|||||| ||||||||||| | | ||| |||||||||||||||||||||||||| ||||
Sbjct: 174 aaagacaggctcagtgaccttcctgatggcattctccttcacattttatcatttatgaat 233
Query: 121 gccaaacatgcagtccaaacatgtgtgttatccacaagatggaaggatctctggaaatat 180
|||||| ||||||| ||||||||| | ||||| | ||||||||||||||||||||| |
Sbjct: 234 gccaaatatgcagttcaaacatgtatcttatcggctagatggaaggatctctggaaacac 293
Query: 181 ctcccaacccttat 194
|| |||||||||||
Sbjct: 294 cttccaacccttat 307
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 502 aatttaccagcattaactaccttgcatctagtgaatttc 540
||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 597 aatttgccagcattaaccaccttgcatctggtgaatttc 635
>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 552
Score = 129 bits (65), Expect = 4e-29
Identities = 122/141 (86%)
Strand = Plus / Plus
Query: 37 agtgagagtgaagatgaagagaacaaagaccggctcagtgacttatcggattgcattctc 96
|||||||||||| |||||||||||||||| | ||||||||||| | |||||| |||||
Sbjct: 355 agtgagagtgaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttctc 414
Query: 97 cttcacattttatcatttgtgaaagccaaacatgcagtccaaacatgtgtgttatccaca 156
||||||||| | ||||||||||| ||||| ||||||| ||||| || |||||||||
Sbjct: 415 cttcacattctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccaca 474
Query: 157 agatggaaggatctctggaaa 177
|||||||||||||||||||||
Sbjct: 475 agatggaaggatctctggaaa 495
>gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (23%)
Length = 714
Score = 117 bits (59), Expect = 2e-25
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 51 tgaagagaacaaagaccggctcagtgacttatcggattgcattctccttcacattttatc 110
|||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 185 tgaagacaacaaagacaggctcagtgacttgcatgattgcattctccttcacattttgtc 244
Query: 111 atttgtgaaagccaaacatgcagtccaaacatgtgtgttatccacaagatggaaggatct 170
|||| ||| |||||| | ||||| | |||||| ||||||||| |||||||||||||||
Sbjct: 245 atttctgagcgccaaatacgcagttcgaacatgcatgttatccaaaagatggaaggatct 304
Query: 171 ctggaaa 177
|||||||
Sbjct: 305 ctggaaa 311
>gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 732
Score = 97.6 bits (49), Expect = 1e-19
Identities = 148/181 (81%)
Strand = Plus / Plus
Query: 35 aaagtgagagtgaagatgaagagaacaaagaccggctcagtgacttatcggattgcattc 94
||||||||||||| | ||| |||||| ||| |||| ||||| || | |||||| |||
Sbjct: 225 aaagtgagagtgagagtaaagtgaacaatgacaggcttagtgatttgcccgattgcgttc 284
Query: 95 tccttcacattttatcatttgtgaaagccaaacatgcagtccaaacatgtgtgttatcca 154
| ||||||||||| |||||||||||||||| ||||||| ||||| || | |||||||
Sbjct: 285 tgcttcacattttgtcatttgtgaaagccaggaatgcagttcaaacttgcatattatcca 344
Query: 155 caagatggaaggatctctggaaatatctcccaacccttattttacattccctagactttt 214
|||||||||||||||| |||||| ||| || | || ||||||| ||||| ||||||||
Sbjct: 345 caagatggaaggatctatggaaaagtcttccttcgctcattttactttccccagactttt 404
Query: 215 c 215
|
Sbjct: 405 c 405
>gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 555
Score = 89.7 bits (45), Expect = 4e-17
Identities = 117/141 (82%)
Strand = Plus / Plus
Query: 37 agtgagagtgaagatgaagagaacaaagaccggctcagtgacttatcggattgcattctc 96
||||||| |||| |||||||||| ||||| |||| ||||||||| | |||||||| |||
Sbjct: 162 agtgagaatgaaattgaagagaacgaagacaggctaagtgacttacccgattgcatcctc 221
Query: 97 cttcacattttatcatttgtgaaagccaaacatgcagtccaaacatgtgtgttatccaca 156
|||||| |||| |||||| |||| ||| || |||||| | ||| |||||||||||
Sbjct: 222 cttcactttttgtcatttctgaacgccggacgtgcagttcgaactaccatgttatccaca 281
Query: 157 agatggaaggatctctggaaa 177
||||||||| |||||||||||
Sbjct: 282 agatggaagaatctctggaaa 302
>gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (6%)
Length = 881
Score = 73.8 bits (37), Expect = 2e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 859 tggctggtaaaccttaccaatataaaatcattgacggtttccacaagtactcttcaggtt 918
||||||||| | ||||||||||||||||||||||| || || |||| ||||||||||||
Sbjct: 262 tggctggtagagcttaccaatataaaatcattgacagtatctgcaagaactcttcaggtt 321
Query: 919 ctctt 923
|||||
Sbjct: 322 ctctt 326
Score = 52.0 bits (26), Expect = 8e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1049 tacctgattgggtagtggattatttgcttcaaaactcaccttctgcaaaggttgacatca 1108
|||||||| | |||||||| | ||| ||||||||||| || || || |||||||||||||
Sbjct: 521 tacctgatggagtagtggactttttacttcaaaactcgccgtccgctaaggttgacatca 580
Query: 1109 ta 1110
||
Sbjct: 581 ta 582
>gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 718
Score = 67.9 bits (34), Expect = 1e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 848 ttcttctcagttggctggtaaaccttaccaatataaaatcattgacggtttccacaagta 907
|||| ||||| ||||||| | | ||||| ||||| ||||||||||| || || |||| ||
Sbjct: 59 ttctactcagctggctggaagagcttactaatatcaaatcattgacagtctctacaaata 118
Query: 908 ctcttcaggttctcttttcaattcct 933
|||||||||||||||| | |||||||
Sbjct: 119 ctcttcaggttctcttcttaattcct 144
>gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (15%)
Length = 592
Score = 56.0 bits (28), Expect = 5e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 142 tgtgtgttatccacaagatggaaggatctctggaaa 177
||||| || |||||||||||||||||||||||||||
Sbjct: 272 tgtgtattgtccacaagatggaaggatctctggaaa 307