Miyakogusa Predicted Gene

Lj0g3v0336359.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0336359.1 tr|G7K3G7|G7K3G7_MEDTR DNA polymerase OS=Medicago
truncatula GN=MTR_5g092100 PE=3
SV=1,34.44,0.000000000000001,seg,NULL,CUFF.22989.1
         (654 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598541 weakly similar to UniRef100_Q8J294 Cluster: Ar...   975   0.0  

>gnl|LJGI|DC598541 weakly similar to UniRef100_Q8J294 Cluster: Arom polypeptide; n=1;
           Thanatephorus cucumeris|Rep: Arom polypeptide -
           Thanatephorus, partial (1%)
          Length = 559

 Score =  975 bits (492), Expect = 0.0
 Identities = 506/513 (98%)
 Strand = Plus / Plus

                                                                       
Query: 126 atctggttcactccaccccagcagaagaaaaatccaatcaatccaggttgctaatgacgt 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  atctggttcactccaccccagcagaagaaaaatccaatcaatccaggttgctaatgacgt 106

                                                                       
Query: 186 cctccacaatagcactgggtctgttaattgtcttcaatctagagaagtttcatactgtct 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 cctccacaatagcactgggtctgttaattgtcttcaatctagagaagtttcatactgtct 166

                                                                       
Query: 246 aaagagaccatcctttgggttgaataaattcaatgtcatgcggcataaccataattctcc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aaagagaccatcctttgggttgaataaattcaatgtcatgcggcataaccataattctcc 226

                                                                       
Query: 306 agtacatatttcagctatgaaattttcaactacatcatgtagcatgttggaggnnnnnnn 365
           |||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct: 227 agtacatatttcagctatgaaattttcaactacatcatgtagcatgttggaggaaaaaaa 286

                                                                       
Query: 366 tcaaatgacagcaggagaaaatttgagttcgtattcctatgaaaaacaagttaagatgat 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tcaaatgacagcaggagaaaatttgagttcgtattcctatgaaaaacaagttaagatgat 346

                                                                       
Query: 426 gcgtggtggggatgaattaggctgggctatgcgtgttaatgatttgtctaaaagaaaaaa 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gcgtggtggggatgaattaggctgggctatgcgtgttaatgatttgtctaaaagaaaaaa 406

                                                                       
Query: 486 ggaagtgtgtgctctgaacccacgttgttcttatccatctaatacaactgcttctgatga 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggaagtgtgtgctctgaacccacgttgttcttatccatctaatacaactgcttctgatga 466

                                                                       
Query: 546 tcagaaacatgtttctaagaagagggggcacaatcttatgctgcaggatcttggtgtacc 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tcagaaacatgtttctaagaagagggggcacaatcttatgctgcaggatcttggtgtacc 526

                                            
Query: 606 tgcatcatcttctgttgaacgttctatattaaa 638
           |||||||||||||||||||||||||||||||||
Sbjct: 527 tgcatcatcttctgttgaacgttctatattaaa 559