Miyakogusa Predicted Gene
- Lj0g3v0336279.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0336279.1 CUFF.22997.1
(556 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61428 weakly similar to UniRef100_A7NV45 Cluster: Chr... 551 e-156
gnl|LJGI|AV780639 UniRef100_Q6WJ33 Cluster: Oocyst wall protein;... 70 2e-11
gnl|LJGI|TC70744 58 6e-08
gnl|LJGI|TC65521 weakly similar to UniRef100_A7NV45 Cluster: Chr... 58 6e-08
gnl|LJGI|DC595827 similar to UniRef100_A7QPK2 Cluster: Chromosom... 54 9e-07
gnl|LJGI|BW596173 52 4e-06
gnl|LJGI|FS354494 similar to UniRef100_A7QKU3 Cluster: Chromosom... 52 4e-06
>gnl|LJGI|TC61428 weakly similar to UniRef100_A7NV45 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (77%)
Length = 1364
Score = 551 bits (278), Expect = e-156
Identities = 278/278 (100%)
Strand = Plus / Plus
Query: 38 caggggtatctgtgtttgaaattgaatatggacgttgggttgaagagcaggatagacaga 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caggggtatctgtgtttgaaattgaatatggacgttgggttgaagagcaggatagacaga 563
Query: 98 atgtggaactaagaaatgcattgcaaactcatgcacctgataacatgcagcttcagatac 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atgtggaactaagaaatgcattgcaaactcatgcacctgataacatgcagcttcagatac 623
Query: 158 ttgttgagggtagcttgagccactactcaaaacttttcaagatgaaagcagatgctgcaa 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgttgagggtagcttgagccactactcaaaacttttcaagatgaaagcagatgctgcaa 683
Query: 218 aagctgatgtcttttatttattctctggttcttggaaagcctcagttgaaagactttttc 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagctgatgtcttttatttattctctggttcttggaaagcctcagttgaaagactttttc 743
Query: 278 tttggattggaggatctcgcccgtcacagcttctaaat 315
||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tttggattggaggatctcgcccgtcacagcttctaaat 781
>gnl|LJGI|AV780639 UniRef100_Q6WJ33 Cluster: Oocyst wall protein; n=1; Cryptosporidium
baileyi|Rep: Oocyst wall protein - Cryptosporidium
baileyi, partial (6%)
Length = 412
Score = 69.9 bits (35), Expect = 2e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 466 gtacattggaaaaataaattgcacccgccagggattgatccccggacctcccccacccaa 525
|||||| ||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||
Sbjct: 180 gtacatcggaaagataaatttcaccctccagg-attgatccctggacctcccccacccaa 122
Query: 526 cctacatgtcc 536
|| | ||||||
Sbjct: 121 cccatatgtcc 111
>gnl|LJGI|TC70744
Length = 860
Score = 58.0 bits (29), Expect = 6e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 480 taaattgcacccgccagggattgatccccggacctcccccacccaacctacatgtcccat 539
|||||||||||||||||||||||| ||| |||||| |||| || |||| | |||| ||
Sbjct: 757 taaattgcacccgccagggattgaaccctggaccttcccctcctaacccatatgttcccc 698
Query: 540 aactcttatcacttgag 556
| |||||| ||||||||
Sbjct: 697 agctcttagcacttgag 681
>gnl|LJGI|TC65521 weakly similar to UniRef100_A7NV45 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (74%)
Length = 1345
Score = 58.0 bits (29), Expect = 6e-08
Identities = 95/117 (81%)
Strand = Plus / Plus
Query: 199 atgaaagcagatgctgcaaaagctgatgtcttttatttattctctggttcttggaaagcc 258
||||||| | ||||||||||||||||||| | |||||| |||| || ||||||||
Sbjct: 669 atgaaagaatatgctgcaaaagctgatgtactctatttactctccggcatgtggaaagcg 728
Query: 259 tcagttgaaagactttttctttggattggaggatctcgcccgtcacagcttctaaat 315
||||| || | | || ||||||||||||||||| ||||| || ||||||||||||
Sbjct: 729 tcagtggagcgcatcttcctttggattggaggatcccgcccctcgcagcttctaaat 785
>gnl|LJGI|DC595827 similar to UniRef100_A7QPK2 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 576
Score = 54.0 bits (27), Expect = 9e-07
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 474 gaaaaataaattgcacccgccagggattgatccccggacctcccccacccaacctacatg 533
||||||||||||||||| |||| ||||||||| | ||||||| ||||||||| | |||
Sbjct: 465 gaaaaataaattgcaccttgcagg-attgatccctgaacctccctcacccaacccatatg 407
Query: 534 tcccataactcttatcacttgag 556
|||| || | |||| ||||||||
Sbjct: 406 tcccgtagcccttaccacttgag 384
>gnl|LJGI|BW596173
Length = 468
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 474 gaaaaataaattgcacccgccagggattgatccccggacctcccccacccaacc 527
|||| ||||||||||||| |||| |||||||||| |||||| | || |||||||
Sbjct: 303 gaaacataaattgcaccctccagtgattgatccctggaccttcacctcccaacc 250
>gnl|LJGI|FS354494 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 684
Score = 52.0 bits (26), Expect = 4e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 479 ataaattgcacccgccaggg-attgatccccggacctcccccaccc 523
|||||||||||| |||||| ||||||||| |||||||||||||||
Sbjct: 616 ataaattgcaccatccaggggattgatccctggacctcccccaccc 571