Miyakogusa Predicted Gene

Lj0g3v0335479.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0335479.1 Non Chatacterized Hit- tr|D8TFT6|D8TFT6_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,23.53,4e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.22916.1
         (1273 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV407490 weakly similar to UniRef100_A7PHM9 Cluster: Ch...   747   0.0  

>gnl|LJGI|AV407490 weakly similar to UniRef100_A7PHM9 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 403

 Score =  747 bits (377), Expect = 0.0
 Identities = 397/403 (98%), Gaps = 3/403 (0%)
 Strand = Plus / Plus

                                                                       
Query: 87  tgaagctcccgtttccagtttgactcagatgttcagattccttcctattgagagttctcc 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaagctcccgtttccagtttgactcagatgttcagattccttcctattgagagttctcc 60

                                                                       
Query: 147 at---atgagaagttaaaccatgtcagagaccaaataaaagcaaaacttcttgaagaagc 203
           ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atcatatgagaagttaaaccatgtcagagaccaaataaaagcaaaacttcttgaagaagc 120

                                                                       
Query: 204 tattgttcctattgagacatacacgaagcagaagcacttctacaagcctcgcgaagttgg 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattgttcctattgagacatacacgaagcagaagcacttctacaagcctcgcgaagttgg 180

                                                                       
Query: 264 caggttactgcctgaattctggaatattttgagtaaggctcgatcggaacaagtatactt 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggttactgcctgaattctggaatattttgagtaaggctcgatcggaacaagtatactt 240

                                                                       
Query: 324 gcttgacctgtcttctcatgatgggaggaaaatcttgagttctgcatttgacagaagcga 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 241 gcttgacctgtcttctcatgatgggaggaaaatcttgagttctgcatttgacagaagcgt 300

                                                                       
Query: 384 gtatgaccgcatactcaattttttagaggtgaaaccagtcaatgttgattggtatgcaaa 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtatgaccgcatactcaattttttagaggtgaaaccagtcaatgttgattggtatgcaaa 360

                                                      
Query: 444 gtgcatccagagctctaatcttgtagatggcgtgtcagaagag 486
           |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 361 gtgcatccagagctctaatcttgtagatggagtgtctgaagag 403