Miyakogusa Predicted Gene

Lj0g3v0334409.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0334409.1 tr|B9I3A8|B9I3A8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_570097 PE=4
SV=1,38.75,9e-18,seg,NULL,CUFF.22837.1
         (1300 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60524 similar to UniRef100_A9BU66 Cluster: Intradiol ...   444   e-124
gnl|LJGI|FS362697 similar to UniRef100_P08399 Cluster: Per-hexam...   208   6e-53

>gnl|LJGI|TC60524 similar to UniRef100_A9BU66 Cluster: Intradiol ring-cleavage
            dioxygenase; n=1; Delftia acidovorans SPH-1|Rep:
            Intradiol ring-cleavage dioxygenase - Delftia acidovorans
            SPH-1, partial (13%)
          Length = 744

 Score =  444 bits (224), Expect = e-124
 Identities = 227/228 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1073 aattttccccaggggcatatatcccatcaaaagatgaattactgacagcattttaccagt 1132
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aatttgccccaggggcatatatcccatcaaaagatgaattactgacagcattttaccagt 60

                                                                        
Query: 1133 ttggtccgctaaaggcatctgaatctcagttgtttaaaggcactggtgttgctcaaattg 1192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttggtccgctaaaggcatctgaatctcagttgtttaaaggcactggtgttgctcaaattg 120

                                                                        
Query: 1193 tttttgtcagaagcacagatgctggagaagcatttcatagcttagaaaagaacaaaccat 1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tttttgtcagaagcacagatgctggagaagcatttcatagcttagaaaagaacaaaccat 180

                                                            
Query: 1253 ttggcacagctcttgttgattacaagcttcatcatcttcctgcagccg 1300
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  ttggcacagctcttgttgattacaagcttcatcatcttcctgcagccg 228


>gnl|LJGI|FS362697 similar to UniRef100_P08399 Cluster: Per-hexamer repeat protein 5;
            n=1; Mus musculus|Rep: Per-hexamer repeat protein 5 - Mus
            musculus (Mouse), partial (7%)
          Length = 645

 Score =  208 bits (105), Expect = 6e-53
 Identities = 108/109 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1192 gtttttgtcagaagcacagatgctggagaagcatttcatagcttagaaaagaacaaacca 1251
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 645  gtttttgtcagaagcacagatgctggagaagcatttcatagcttagaaaaggacaaacca 586

                                                             
Query: 1252 tttggcacagctcttgttgattacaagcttcatcatcttcctgcagccg 1300
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585  tttggcacagctcttgttgattacaagcttcatcatcttcctgcagccg 537