Miyakogusa Predicted Gene
- Lj0g3v0334259.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0334259.1 tr|C1FHQ2|C1FHQ2_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_62160
,36.21,1e-18,no description,ssDNA-binding transcriptional regulator;
seg,NULL; ssDNA-binding transcriptional regu,CUFF.22818.1
(780 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62927 similar to UniRef100_Q9LL85 Cluster: DNA-bindin... 1538 0.0
gnl|LJGI|TC69700 similar to UniRef100_A7Q2S9 Cluster: Chromosome... 218 4e-56
gnl|LJGI|TC66853 similar to UniRef100_A7Q2S9 Cluster: Chromosome... 174 5e-43
>gnl|LJGI|TC62927 similar to UniRef100_Q9LL85 Cluster: DNA-binding protein p24; n=1;
Solanum tuberosum|Rep: DNA-binding protein p24 - Solanum
tuberosum (Potato), partial (69%)
Length = 952
Score = 1538 bits (776), Expect = 0.0
Identities = 779/780 (99%)
Strand = Plus / Plus
Query: 1 atgttgcatttgcagttgcagctacactcaccaccaccactactcttatcatcttcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atgttgcatttgcagttgcagctacactcaccaccaccactactcttatcatcttcttct 113
Query: 61 tcccttaagcttcccccaaacccacactctttatccctaaaacgttttccttctaaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tcccttaagcttcccccaaacccacactctttatccctaaaacgttttccttctaaaccc 173
Query: 121 ctcactctcatcagatgccgccactcagacctgttcgaccaaaaaaccttctcctcctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ctcactctcatcagatgccgccactcagacctgttcgaccaaaaaaccttctcctcctcc 233
Query: 181 actccacaacctgcaaaccccgctgctgtttcagttggagctttgccacctagggtttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 actccacaacctgcaaaccccgctgctgtttcagttggagctttgccacctagggtttat 293
Query: 241 gttggtcactccatttacaaagggaaggctgctctcacagtcactcctagacctccagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gttggtcactccatttacaaagggaaggctgctctcacagtcactcctagacctccagaa 353
Query: 301 ttcgcaccactcgattcaggggcattcaaaatatctagggagggttatgtgttgcttcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttcgcaccactcgattcaggggcattcaaaatatctagggagggttatgtgttgcttcag 413
Query: 361 tttgcgcctgccattgcttcgcgccaatatgattggaatcgaaagcaggtgttctcgtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tttgcgcctgccattgcttcgcgccaatatgattggaatcgaaagcaggtgttctcgtta 473
Query: 421 tctgttgttgaaatgggaagtgtgattagtctaggtacaagggagtcttgtgaatttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tctgttgttgaaatgggaagtgtgattagtctaggtacaagggagtcttgtgaatttttt 533
Query: 481 catgatcctttgaagggaaaaagtgatgaaggtaaagtcaggaaagtcttgaagttggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 catgatcctttgaagggaaaaagtgatgaaggtaaagtcaggaaagtcttgaagttggaa 593
Query: 541 cctcttccagatggttctggtcacttctttaacctcagtgttcaaaacaagattgtgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cctcttccagatggttctggtcacttctttaacctcagtgttcaaaacaagattgtgaac 653
Query: 601 attgatgaaaacatctatatccctgttacaaaagcagagttagcagttttgagctcaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 attgatgaaaacatctatatccctgttacaaaagcagagttagcagttttgagctcaatt 713
Query: 661 ttcaattttatcatgccataccttctagggtggcatacctttgcaaactccgtaaacccg 720
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 714 ttcaattttatcatgccataccctctagggtggcatacctttgcaaactccgtaaacccg 773
Query: 721 gagtattccagtggagtgaataatgccaacccaaggtatggaggagactatgaatggaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gagtattccagtggagtgaataatgccaacccaaggtatggaggagactatgaatggaac 833
>gnl|LJGI|TC69700 similar to UniRef100_A7Q2S9 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 1104
Score = 218 bits (110), Expect = 4e-56
Identities = 275/330 (83%)
Strand = Plus / Plus
Query: 387 atatgattggaatcgaaagcaggtgttctcgttatctgttgttgaaatgggaagtgtgat 446
|||||||||||| |||||||||| ||||| |||| || |||||||||| | | ||
Sbjct: 386 atatgattggaacagaaagcaggtattctcactatcagtaaatgaaatgggagctctaat 445
Query: 447 tagtctaggtacaagggagtcttgtgaattttttcatgatcctttgaagggaaaaagtga 506
||| || ||| |||||| ||| ||||||||| | | ||||||||| ||||||||||||||
Sbjct: 446 tagccttggtgcaagggggtcctgtgaatttgtacgtgatccttttaagggaaaaagtga 505
Query: 507 tgaaggtaaagtcaggaaagtcttgaagttggaacctcttccagatggttctggtcactt 566
|||||||||| |||| ||||| |||||| |||| || |||| |||||||||||||||||
Sbjct: 506 tgaaggtaaaatcagaaaagttttgaaggtggagccacttctggatggttctggtcactt 565
Query: 567 ctttaacctcagtgttcaaaacaagattgtgaacattgatgaaaacatctatatccctgt 626
|||||| | ||||||||||||||| | ||| | || |||| ||||| | | |||||
Sbjct: 566 gtttaacttaagtgttcaaaacaagctcaagaatgtggacgaaagcatctttgttcctgt 625
Query: 627 tacaaaagcagagttagcagttttgagctcaattttcaattttatcatgccataccttct 686
|||||||||||||||||||||||| | |||| |||||||||||||| |||||||||||||
Sbjct: 626 tacaaaagcagagttagcagtttttaactcacttttcaattttatcttgccataccttct 685
Query: 687 agggtggcatacctttgcaaactccgtaaa 716
||| ||| || | |||| ||||||| ||||
Sbjct: 686 aggttggaatgcttttggaaactccataaa 715
>gnl|LJGI|TC66853 similar to UniRef100_A7Q2S9 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 1026
Score = 174 bits (88), Expect = 5e-43
Identities = 232/280 (82%)
Strand = Plus / Plus
Query: 387 atatgattggaatcgaaagcaggtgttctcgttatctgttgttgaaatgggaagtgtgat 446
|||||||||||| |||||||||| ||||| |||| || |||||||||| | | ||
Sbjct: 390 atatgattggaacagaaagcaggtattctcactatcagtaaatgaaatgggagctctaat 449
Query: 447 tagtctaggtacaagggagtcttgtgaattttttcatgatcctttgaagggaaaaagtga 506
||| || ||| |||||| ||| ||||||||| | | ||||||||| ||||||||||||||
Sbjct: 450 tagccttggtgcaagggggtcctgtgaatttgtacgtgatccttttaagggaaaaagtga 509
Query: 507 tgaaggtaaagtcaggaaagtcttgaagttggaacctcttccagatggttctggtcactt 566
|||||||||| |||| ||||| |||||| |||| || |||| |||||||||||||||||
Sbjct: 510 tgaaggtaaaatcagaaaagttttgaaggtggagccacttctggatggttctggtcactt 569
Query: 567 ctttaacctcagtgttcaaaacaagattgtgaacattgatgaaaacatctatatccctgt 626
|||||| | ||||||||||||||| | ||| | || |||| ||||| | | |||||
Sbjct: 570 gtttaacttaagtgttcaaaacaagctcaagaatgtggacgaaagcatctttgttcctgt 629
Query: 627 tacaaaagcagagttagcagttttgagctcaattttcaat 666
|||||||||||||||||||||||| | |||| ||||||||
Sbjct: 630 tacaaaagcagagttagcagtttttaactcacttttcaat 669