Miyakogusa Predicted Gene

Lj0g3v0334159.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0334159.1 Non Chatacterized Hit- tr|F6H3Y5|F6H3Y5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,73.02,0,AAA,ATPase, AAA-type, conserved site; no description,NULL;
ATPases associated with a variety of cell,CUFF.22802.1
         (1965 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78373 similar to UniRef100_A7P9T6 Cluster: Chromosome...   333   2e-90

>gnl|LJGI|TC78373 similar to UniRef100_A7P9T6 Cluster: Chromosome chr14 scaffold_9,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_9, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 531

 Score =  333 bits (168), Expect = 2e-90
 Identities = 180/184 (97%)
 Strand = Plus / Plus

                                                                        
Query: 1782 gggtcccctaagagaggctttaaagcaaggcatagaaattacaaatttgaaaaaggagga 1841
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gggtcccctaagagaggctttaaagcaaggcatagaaattacaaatttgaaaaaggagga 60

                                                                        
Query: 1842 tatgcggccagtcactcttcaggacttcgagaatgccctgcaagaggtgaggccttctgt 1901
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61   tatgcggccagtcactcttcaggacttcgagaatgccctgccagaggtgaggccttctgt 120

                                                                        
Query: 1902 ttcgccaaatgaacttggtacttatgagcaatggaataaacaatttggaagtctatcatt 1961
            ||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 121  ttcgccaaatgcacttggtacttatgagcaatggcataaaccatttggaagtctatcatt 180

                
Query: 1962 gtga 1965
            ||||
Sbjct: 181  gtga 184