Miyakogusa Predicted Gene

Lj0g3v0333249.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0333249.1 Non Chatacterized Hit- tr|D8U6A7|D8U6A7_VOLCA
Putative uncharacterized protein OS=Volvox carteri GN=,55.26,3e-18,
,CUFF.22729.1
         (380 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78631 similar to UniRef100_Q8L8Q8 Cluster: Uncharacte...   494   e-139

>gnl|LJGI|TC78631 similar to UniRef100_Q8L8Q8 Cluster: Uncharacterized protein
           At5g64816 precursor; n=2; Arabidopsis thaliana|Rep:
           Uncharacterized protein At5g64816 precursor -
           Arabidopsis thaliana (Mouse-ear cress), partial (60%)
          Length = 504

 Score =  494 bits (249), Expect = e-139
 Identities = 249/249 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggggatatctggtggtctcttttgggggctgcaatccctgtggttgttgcgggacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atgggggatatctggtggtctcttttgggggctgcaatccctgtggttgttgcgggacag 315

                                                                       
Query: 61  gctttcagagtgaagaaaaggcgcgctgaagagcagaggctgacaagcgcgagggggaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gctttcagagtgaagaaaaggcgcgctgaagagcagaggctgacaagcgcgagggggaga 375

                                                                       
Query: 121 gaaaggagttctgatgaaatatttgtctgtgaaagggtctgcacatcaaagaggatgttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaaaggagttctgatgaaatatttgtctgtgaaagggtctgcacatcaaagaggatgttg 435

                                                                       
Query: 181 aaaaaggtgggttcattctcaaaagatcccattcccgatacttgtgttactgtctgtggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aaaaaggtgggttcattctcaaaagatcccattcccgatacttgtgttactgtctgtggt 495

                    
Query: 241 gtatctgat 249
           |||||||||
Sbjct: 496 gtatctgat 504