Miyakogusa Predicted Gene

Lj0g3v0333099.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0333099.1 Non Chatacterized Hit- tr|I3T6H9|I3T6H9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,The
RING-variant domain is a C4HC3 zinc-fing,Zinc finger, RING-CH-type;
RING/U-box,NULL; seg,NULL; n,CUFF.22846.1
         (462 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79183 similar to UniRef100_Q6YW60 Cluster: Zinc finge...   916   0.0  

>gnl|LJGI|TC79183 similar to UniRef100_Q6YW60 Cluster: Zinc finger (C3HC4-type RING
           finger) protein-like; n=1; Oryza sativa Japonica
           Group|Rep: Zinc finger (C3HC4-type RING finger)
           protein-like - Oryza sativa subsp. japonica (Rice),
           partial (82%)
          Length = 1359

 Score =  916 bits (462), Expect = 0.0
 Identities = 462/462 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaggggaagtgcaactccaacctcctccgattatgcaaaaccctagtgattccgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgaaaggggaagtgcaactccaacctcctccgattatgcaaaaccctagtgattccgac 239

                                                                       
Query: 61  cctttactccttgaccatgatgaggatgagtcccctttgagctctgctgagattaaggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cctttactccttgaccatgatgaggatgagtcccctttgagctctgctgagattaaggat 299

                                                                       
Query: 121 gaggaggatgttgaggctggttcactcccttgttgtcgaatttgcctcgaaagcgattcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gaggaggatgttgaggctggttcactcccttgttgtcgaatttgcctcgaaagcgattcc 359

                                                                       
Query: 181 gacccagaagatgaattgatatctccatgcatgtgcaaagggacccagcagttcgtccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gacccagaagatgaattgatatctccatgcatgtgcaaagggacccagcagttcgtccat 419

                                                                       
Query: 241 cgttcatgtcttgatcactggcgctcagttaaggaaggatttgccttctcacactgtacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgttcatgtcttgatcactggcgctcagttaaggaaggatttgccttctcacactgtacc 479

                                                                       
Query: 301 acctgcaaggcccaatttcatcttagagttgaatcgtatgaggacaactcttggcgtaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 acctgcaaggcccaatttcatcttagagttgaatcgtatgaggacaactcttggcgtaaa 539

                                                                       
Query: 361 ataaagttcagactttttgtggcaagggatgttttccttgtttttgttgctgtacaaact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ataaagttcagactttttgtggcaagggatgttttccttgtttttgttgctgtacaaact 599

                                                     
Query: 421 gtgattgctgctattggtggctttgcctacatcatggacaaa 462
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtgattgctgctattggtggctttgcctacatcatggacaaa 641