Miyakogusa Predicted Gene
- Lj0g3v0333039.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0333039.2 Non Chatacterized Hit- tr|B9G5Y6|B9G5Y6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,36.36,9e-19,no
description,Six-bladed beta-propeller, TolB-like; FAMILY NOT
NAMED,NULL; seg,NULL; NHL repeat,NUL,CUFF.22709.2
(846 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338735 weakly similar to UniRef100_A7P3K5 Cluster: Ch... 640 0.0
gnl|LJGI|TC74759 similar to UniRef100_A7P3K5 Cluster: Chromosome... 115 5e-25
gnl|LJGI|BP051376 similar to UniRef100_A7P3K5 Cluster: Chromosom... 80 3e-14
>gnl|LJGI|FS338735 weakly similar to UniRef100_A7P3K5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 753
Score = 640 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Plus
Query: 279 ccctccgttcaacgccctcgccgcctacgacctccgcacccgcgaccgcctcttcctcac 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccctccgttcaacgccctcgccgcctacgacctccgcacccgcgaccgcctcttcctcac 490
Query: 339 cccactcccctccgacgatgaccaccccgccgcagccaacgacgtcgccgtcgatcacca 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cccactcccctccgacgatgaccaccccgccgcagccaacgacgtcgccgtcgatcacca 550
Query: 399 cggcaacgccttcgtcaccaactccgccgggaacttcatctggaaggtcaccgccgacgg 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cggcaacgccttcgtcaccaactccgccgggaacttcatctggaaggtcaccgccgacgg 610
Query: 459 acacgcctcgatcttctccagatccccgatgttctcgccggcaaacacacctcccgttga 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 acacgcctcgatcttctccagatccccgatgttctcgccggcaaacacacctcccgttga 670
Query: 519 cggcgacatcaacctcctagggctcaacgggatcacctacgtcagcaagggttacctcct 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cggcgacatcaacctcctagggctcaacgggatcacctacgtcagcaagggttacctcct 730
Query: 579 ggtggtgcaatcgagcaccggga 601
|||||||||||||||||||||||
Sbjct: 731 ggtggtgcaatcgagcaccggga 753
Score = 470 bits (237), Expect = e-132
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 42 tgtaatattattgggcccaagcccaattctcgctcggagcgctcacgtcatcaatttccg 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgtaatattattgggcccaagcccaattctcgctcggagcgctcacgtcatcaatttccg 208
Query: 102 gtcaccgaacttgtacccagaatccctcacgtgggacccacgagcccagcacttcctcct 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gtcaccgaacttgtacccagaatccctcacgtgggacccacgagcccagcacttcctcct 268
Query: 162 cggatcctaccggcaacgcaccatcgccgccgtctctgacgccggcgtcgtcgaaacctt 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cggatcctaccggcaacgcaccatcgccgccgtctctgacgccggcgtcgtcgaaacctt 328
Query: 222 catcaccgacccctccctccctgacggcgcctccatcctcggtctcgccgtcaattc 278
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 catcaccgacccctccctccctgacggcgcctccatcctcggtctcgccgtcaattc 385
>gnl|LJGI|TC74759 similar to UniRef100_A7P3K5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1403
Score = 115 bits (58), Expect = 5e-25
Identities = 133/158 (84%)
Strand = Plus / Plus
Query: 85 cacgtcatcaatttccggtcaccgaacttgtacccagaatccctcacgtgggacccacga 144
||||| ||||| |||| |||||| | | | ||||| ||||||||| |||||||||||
Sbjct: 211 cacgtaatcaacttccagtcacccagcctctaccccgaatccctcgcgtgggacccaaac 270
Query: 145 gcccagcacttcctcctcggatcctaccggcaacgcaccatcgccgccgtctctgacgcc 204
|| ||||||||||| |||||||| ||| || ||||||||| |||||||||| |||||
Sbjct: 271 gcgcagcacttccttgtcggatccatccgccaccgcaccatctccgccgtctccgacgct 330
Query: 205 ggcgtcgtcgaaaccttcatcaccgacccctccctccc 242
||||| ||||||||| ||||| ||||||||||||||||
Sbjct: 331 ggcgtagtcgaaaccctcatctccgacccctccctccc 368
Score = 109 bits (55), Expect = 3e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 279 ccctccgttcaacgccctcgccgcctacgacctccgcacccgcgaccgcctcttcctcac 338
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 450 ccctccgttcaacgccctcgccgcctacgacctccgctcccgccgccgcctcttcctcac 509
Query: 339 cccactcccctccga 353
|| |||||||||||
Sbjct: 510 ccacctcccctccga 524
>gnl|LJGI|BP051376 similar to UniRef100_A7P3K5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 407
Score = 79.8 bits (40), Expect = 3e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 803 gggagggtggagggttcaaagagggagagttttgggattgctga 846
|||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 399 gggaggttggagggttcaaagagggagagttttgggattgctga 356