Miyakogusa Predicted Gene

Lj0g3v0332909.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0332909.1 Non Chatacterized Hit- tr|D7T813|D7T813_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.91,0,1,4-ALPHA-GLUCAN-BRANCHING ENZYME (GLYCOGEN-BRANCHING
ENZYME)(BRANCHER ENZYME),NULL; ALPHA-AMYLASE,G,CUFF.22703.1
         (1212 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV778788 similar to UniRef100_A7P0L5 Cluster: Chromosom...   170   1e-41

>gnl|LJGI|AV778788 similar to UniRef100_A7P0L5 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (4%)
          Length = 352

 Score =  170 bits (86), Expect = 1e-41
 Identities = 113/123 (91%), Gaps = 1/123 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1091 aagaccagtattatnnnnnnnctatcagcagaagagtcgatggccttcgaaactgcttag 1150
            ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 352  aagaccagtattataaaaaaactatcagcagaagagtcgatggccttcgaaactgcttag 293

                                                                        
Query: 1151 tggtgtca-ctccctagcagaactgctcaggtttacaagctaaagcggattttaagaata 1209
            |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 292  tggtgtcagctccctaccagaactgctcaggtttaccagctaaagcggattttaagaata 233

               
Query: 1210 taa 1212
            |||
Sbjct: 232  taa 230