Miyakogusa Predicted Gene
- Lj0g3v0332899.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0332899.1 Non Chatacterized Hit- tr|B9STZ0|B9STZ0_RICCO
Cell differentiation protein rcd1, putative
OS=Ricinus,85.27,0,Rcd1,Cell differentiation, Rcd1-like; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,Cell differentiation,CUFF.22724.1
(996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59757 homologue to UniRef100_A7P0L4 Cluster: Chromoso... 1974 0.0
gnl|LJGI|TC65798 similar to UniRef100_A7P0L4 Cluster: Chromosome... 353 1e-96
gnl|LJGI|BP050970 similar to UniRef100_Q802Y4 Cluster: Zgc:55733... 54 2e-06
>gnl|LJGI|TC59757 homologue to UniRef100_A7P0L4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1233
Score = 1974 bits (996), Expect = 0.0
Identities = 996/996 (100%)
Strand = Plus / Plus
Query: 1 atgtttcagagaagacagcagcagaaagaagctgatatgctcagtgacatggccaatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 atgtttcagagaagacagcagcagaaagaagctgatatgctcagtgacatggccaatttg 97
Query: 61 tcacaagcattcggtggcggtgccggtgctccaccaccgccacctcctcctcctcacggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 tcacaagcattcggtggcggtgccggtgctccaccaccgccacctcctcctcctcacggt 157
Query: 121 ggtccctcctcatccaacaagatggccggtgcggagcagcttgtccttgaactcagcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ggtccctcctcatccaacaagatggccggtgcggagcagcttgtccttgaactcagcaac 217
Query: 181 cctgatctccgtgaaaatgctcttctcgaactctccaagaaaagggagctgtttcaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cctgatctccgtgaaaatgctcttctcgaactctccaagaaaagggagctgtttcaagat 277
Query: 241 cttgctccattgttatggaattcttttgggactattgctgcacttttgcaggaaatagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cttgctccattgttatggaattcttttgggactattgctgcacttttgcaggaaatagtt 337
Query: 301 tctatataccctgtcctttcaccacccactcttactccagcgcaatcaaatcgggtgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctatataccctgtcctttcaccacccactcttactccagcgcaatcaaatcgggtgtgc 397
Query: 361 aatgctcttgctcttcttcagtgtgtggcgtctcaccctgatacaaggatgcaattcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aatgctcttgctcttcttcagtgtgtggcgtctcaccctgatacaaggatgcaattcctc 457
Query: 421 aatgctcatatccctctgtatctgtatcctttccttaatacaacaagcaagtcaagacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aatgctcatatccctctgtatctgtatcctttccttaatacaacaagcaagtcaagacca 517
Query: 481 tttgagtacctgaggctcaccagtcttggtgtcattggtgcattggtgaaggttgatgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tttgagtacctgaggctcaccagtcttggtgtcattggtgcattggtgaaggttgatgat 577
Query: 541 acggaggtcataagttttcttctttcaactgagataattcctctttgcctgcgcaccatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 acggaggtcataagttttcttctttcaactgagataattcctctttgcctgcgcaccatg 637
Query: 601 gaaatgggcagtgaactgtcaaaaacagttgcaacatttattgttcaaaagattctgttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gaaatgggcagtgaactgtcaaaaacagttgcaacatttattgttcaaaagattctgttg 697
Query: 661 gatgatgtgggcttggattatatttgcactacagcagagcgttttttcgcagtaggtcga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gatgatgtgggcttggattatatttgcactacagcagagcgttttttcgcagtaggtcga 757
Query: 721 gttttagggaacatggtgggagctcttgctgagcagcaatcaactcgtctgctgaaacat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gttttagggaacatggtgggagctcttgctgagcagcaatcaactcgtctgctgaaacat 817
Query: 781 atcattcgatgctatcttcgcctttctgataatccaagggcttgtgatgcattaagaagc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 atcattcgatgctatcttcgcctttctgataatccaagggcttgtgatgcattaagaagc 877
Query: 841 tgtcttccagacatgttaagggatgctactttcagcagttgccttcgtgaggacaccaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 tgtcttccagacatgttaagggatgctactttcagcagttgccttcgtgaggacaccaca 937
Query: 901 actaggaggtggctacagcaactgcttcacaatgttggatcaggtcgggtccctgcaatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 actaggaggtggctacagcaactgcttcacaatgttggatcaggtcgggtccctgcaatg 997
Query: 961 caagctggaggtttcgatcatataatggtaaactga 996
||||||||||||||||||||||||||||||||||||
Sbjct: 998 caagctggaggtttcgatcatataatggtaaactga 1033
>gnl|LJGI|TC65798 similar to UniRef100_A7P0L4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 737
Score = 353 bits (178), Expect = 1e-96
Identities = 377/442 (85%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 169 gaactcagcaaccctgatctccgtgaaaatgctcttctcgaactctccaagaaaagggag 228
|||||||||||||| |||| |||||||| ||||||| |||||||||||||| |||||
Sbjct: 276 gaactcagcaaccccgatcatcgtgaaaacgctcttcatgaactctccaagaagagggaa 335
Query: 229 ctgtttcaagatcttgctccattgttatggaattcttttgggactattgctgcacttttg 288
|| |||| ||||| ||||| | | |||||||||||||| || ||||| |||||||||
Sbjct: 336 gtggttcaggatctcgctccgctaatttggaattcttttggtaccattgccgcacttttg 395
Query: 289 caggaaatagtttctatataccctgtcctttcaccacccactcttactccagcgcaatca 348
||||||||| ||| |||||||||| |||||||||| |||||| ||||||| ||||||
Sbjct: 396 caggaaataacttcagtataccctgttatttcaccaccaactctttctccagcacaatca 455
Query: 349 aatcgggtgtgcaatgctcttgctcttcttcagtgtgtggcgtctcaccctgatacaagg 408
||||| ||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||
Sbjct: 456 aatcgagtgtgcaatgcacttgctctacttcagtatgtggcatctcaccgtgatacaagg 515
Query: 409 atgcaattcctcaatgctcatatccctctgtatctgtatcctttccttaatacaacaagc 468
||| ||||||||||||||| | | ||| ||||||||||| |||||||| |||||||||
Sbjct: 516 ttgctattcctcaatgctcacttacatctatatctgtatcccttccttaagacaacaagc 575
Query: 469 aagtcaagaccatttgagtacctgaggctcaccagtcttggtgtcattggtgcattggtg 528
||| ||| ||||||||||| || |||| ||||||||||||||||||||||| ||||||
Sbjct: 576 aaggcaaagccatttgagtatttgcggcttaccagtcttggtgtcattggtgccttggtg 635
Query: 529 aaggttgatgatacggaggtcataagttttcttctttcaactgagataattcctctttgc 588
|| ||||| || ||| | |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 636 aa-gttgaagacgtggaaattataagtttccttctttcaacggagataattcctctctgc 694
Query: 589 ctgcgcaccatggaaatgggca 610
|||| |||||||||||| ||||
Sbjct: 695 ctgcacaccatggaaatcggca 716
>gnl|LJGI|BP050970 similar to UniRef100_Q802Y4 Cluster: Zgc:55733; n=2; Danio
rerio|Rep: Zgc:55733 - Danio rerio (Zebrafish)
(Brachydanio rerio), partial (6%)
Length = 479
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 169 gaactcagcaaccctgatctccgtgaaaatgctcttctcgaactctccaag 219
|||||||||||||| |||| |||||||| ||||||| ||||||||||||
Sbjct: 233 gaactcagcaaccccgatcatcgtgaaaacgctcttcatgaactctccaag 283