Miyakogusa Predicted Gene

Lj0g3v0332859.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0332859.2 Non Chatacterized Hit- tr|B9RXU4|B9RXU4_RICCO
Serine-threonine protein kinase, plant-type, putative
,40,2e-18,PROTEIN_KINASE_ATP,Protein kinase, ATP binding site; Protein
kinase-like (PK-like),Protein kinase-li,CUFF.22698.2
         (465 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS328383 similar to UniRef100_A7QZY6 Cluster: Chromosom...   212   1e-54
gnl|LJGI|FS354266 weakly similar to UniRef100_Q8GWJ7 Cluster: Cy...   172   1e-42

>gnl|LJGI|FS328383 similar to UniRef100_A7QZY6 Cluster: Chromosome undetermined
           scaffold_293, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_293,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (5%)
          Length = 810

 Score =  212 bits (107), Expect = 1e-54
 Identities = 107/107 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtatcccagctgcaatatgaggtttgaattgtcccaattttacagaattgaaggtccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atgtatcccagctgcaatatgaggtttgaattgtcccaattttacagaattgaaggtccc 379

                                                          
Query: 61  aaagctcaaccacccaattcacctctgagtccatcaggatctacagg 107
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaagctcaaccacccaattcacctctgagtccatcaggatctacagg 332


>gnl|LJGI|FS354266 weakly similar to UniRef100_Q8GWJ7 Cluster: Cysteine-rich
           receptor-like protein kinase 19 precursor; n=1;
           Arabidopsis thaliana|Rep: Cysteine-rich receptor-like
           protein kinase 19 precursor - Arabidopsis thaliana
           (Mouse-ear cress), partial (20%)
          Length = 665

 Score =  172 bits (87), Expect = 1e-42
 Identities = 114/123 (92%)
 Strand = Plus / Plus

                                                                       
Query: 257 ttggtaatgaaagtgcaactgtagagccattacaattcgattttgtcgtaattcaagcag 316
           |||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||
Sbjct: 40  ttggtaatgaaagtgcaactttagagccattgcaattcgattttgccgtaattgaagcag 99

                                                                       
Query: 317 caactaacaacttttctgaggacaattacattggcaaaggcggatttggaaaggtttata 376
           |||| |||||||||||| | |||||||||||||||||||| ||||||||| |||||||||
Sbjct: 100 caaccaacaacttttctcatgacaattacattggcaaaggtggatttggagaggtttata 159

              
Query: 377 agg 379
           |||
Sbjct: 160 agg 162



 Score =  119 bits (60), Expect = 2e-26
 Identities = 81/88 (92%)
 Strand = Plus / Plus

                                                                       
Query: 377 agggtattcttcataatggacaacaaatagcagttaagcgactttcagaaagttctaagc 436
           |||||| ||||| | ||||||||||||||||||| ||| |||||||||||||||| ||||
Sbjct: 230 agggtactcttcttgatggacaacaaatagcagtaaagagactttcagaaagttcgaagc 289

                                       
Query: 437 aaggtgttgatgagttcaagaacgaagt 464
           ||||||| ||||||||||||||||||||
Sbjct: 290 aaggtgtcgatgagttcaagaacgaagt 317