Miyakogusa Predicted Gene
- Lj0g3v0332629.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0332629.1 Non Chatacterized Hit- tr|I1MEF2|I1MEF2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.86,0,DUF382,Domain
of unknown function DUF382; PSP,PSP, proline-rich; seg,NULL; SUBFAMILY
NOT NAMED,NULL;,CUFF.22686.1
(1680 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74478 similar to UniRef100_A2Q200 Cluster: PSP, proli... 733 0.0
gnl|LJGI|TC58527 similar to UniRef100_A7QYP7 Cluster: Chromosome... 412 e-114
gnl|LJGI|AV412670 similar to UniRef100_A2Q200 Cluster: PSP, prol... 285 4e-76
gnl|LJGI|TC78197 similar to UniRef100_A2Q200 Cluster: PSP, proli... 131 2e-29
gnl|LJGI|BP049935 similar to UniRef100_Q9SVT1 Cluster: Spliceoso... 127 2e-28
>gnl|LJGI|TC74478 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1;
Medicago truncatula|Rep: PSP, proline-rich - Medicago
truncatula (Barrel medic), partial (42%)
Length = 1189
Score = 733 bits (370), Expect = 0.0
Identities = 480/513 (93%), Gaps = 4/513 (0%)
Strand = Plus / Plus
Query: 382 cttcaacagaggatgaaaattgctcaactgaaacaaatttgctcaagacctgatgttgtt 441
|||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||||||||
Sbjct: 178 cttcaacagaggatgaaaattgctgaactgaaacatatttgctcaaggccttatgttgtt 237
Query: 442 gaggtgtgggatgctactgcattagacccaaag--ttgcttgtgtttttcaaatcttata 499
|||| ||||||||||||||||| |||||||||| ||||| |||||||| ||||||||||
Sbjct: 238 gaggcgtgggatgctactgcatcagacccaaaggtttgctggtgtttttgaaatcttata 297
Query: 500 ggaatactgtaccagtgcctaggcattggagtcagaagagaaa-ttttttgcaagggaaa 558
||||||||||||| |||||||| |||||||||||||||||||| ||||||| |||| ||
Sbjct: 298 ggaatactgtacctgtgcctagacattggagtcagaagagaaaggtttttgc-aggggaa 356
Query: 559 cgaggtattcagaaacaaccctttcagcttcctcatttcattgctgccactggaattgag 618
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 357 cgaggtatcgagaaacaaccctttcagcttcctgatttcattgctgccactggaattgag 416
Query: 619 aaaatcagacaggcttatattgacaaagaggacggtaaaaagctcaaacaaaaacagagg 678
||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||| |||
Sbjct: 417 aaaatcagacaggcttatattgagaaagaggatggtaaaaggctgaaacaaaaacaaagg 476
Query: 679 gaacgcatgcaaccaaaaatggggaaaatggacatagactatcgggttcttcatgatgca 738
|||| | |||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 477 gaacacttgcaaccaaaaatggggaaaatggacatagactatcagattcttcatgatgca 536
Query: 739 tttttcaagtaccagacaaagccaaaactgacttctctcggggagctgtatcatgaagga 798
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 537 tttttcaagtaccagacaaagccaaagctgacttctcttggggagctgtatcatgaagga 596
Query: 799 agagaatttgaggtaaagttgagggagatgaaacctggcatgttatcacatgaattgaaa 858
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 597 aaagaatttgaggtaaagttgagggagatgaaacctgacatgttatcacatgaattgaaa 656
Query: 859 gaagctcttggtatgcctgagggtgccccttct 891
||||||| |||||||||||||||||||||||||
Sbjct: 657 gaagctcctggtatgcctgagggtgccccttct 689
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1087 aactatgaggaagagccagttgataagaccaaacactggggtgat 1131
||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 690 aactatgaggaggagccagtttttaataccaaacactggggtgat 734
>gnl|LJGI|TC58527 similar to UniRef100_A7QYP7 Cluster: Chromosome undetermined
scaffold_252, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_252,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 802
Score = 412 bits (208), Expect = e-114
Identities = 247/260 (95%)
Strand = Plus / Plus
Query: 382 cttcaacagaggatgaaaattgctcaactgaaacaaatttgctcaagacctgatgttgtt 441
||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 540 cttcaacggaggatgaaaattgctgaactgaaacaaatttgctcaaggcctgatgttgtt 599
Query: 442 gaggtgtgggatgctactgcattagacccaaagttgcttgtgtttttcaaatcttatagg 501
|||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||
Sbjct: 600 gaggtgtgggatgctactgcatcagacccaaagttgctggtgtttttgaaatcttatagg 659
Query: 502 aatactgtaccagtgcctaggcattggagtcagaagagaaattttttgcaagggaaacga 561
|| |||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 660 aacactgtacctgtgcctaggcattggagtcagaagagaaaatttttgcaggggaaacga 719
Query: 562 ggtattcagaaacaaccctttcagcttcctcatttcattgctgccactggaattgagaaa 621
|||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 720 ggtattgagaaacagccctttcagcttcctgatttcattgctgccactggaattgagaaa 779
Query: 622 atcagacaggcttatattga 641
||||||||||||||||||||
Sbjct: 780 atcagacaggcttatattga 799
Score = 101 bits (51), Expect = 1e-20
Identities = 191/237 (80%), Gaps = 23/237 (9%)
Strand = Plus / Plus
Query: 67 cgccgccgtaagcagaagaagatcaacaaagcatctcaagaggc-gagacctaaaaccgc 125
|||||||||||||||||||| | ||||||| ||||| |||| | ||| |||||||||||
Sbjct: 183 cgccgccgtaagcagaagaaaaacaacaaatcatctgaagaatccgag-cctaaaaccgc 241
Query: 126 taaagataat---------aatgagaacactgatccaaagcaggttgctgaacaagttga 176
| |||||||| || || ||||||||||| |||||||||| |||||||||||
Sbjct: 242 tgaagataatgacgacgccaaggaaaacactgatccgaagcaggttgtggaacaagttga 301
Query: 177 ------gtatgtatgggagaagtccgagttagatgaaggcatggatgaacaatttagaag 230
|||||| ||||||| | ||| |||||||||||||||||||| ||||||||||
Sbjct: 302 aattgagtatgtgccggagaaggcggagctagatgaaggcatggatgaagaatttagaag 361
Query: 231 aatcattgagaaattcagtttca------tcgcaggttctgaggatacttataagaa 281
|||| ||||||| |||||||||| |||| ||||||||||||||| |||||||
Sbjct: 362 aatctttgagaagttcagtttcagtgatgtcgctggttctgaggatactgataagaa 418
>gnl|LJGI|AV412670 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1;
Medicago truncatula|Rep: PSP, proline-rich - Medicago
truncatula (Barrel medic), partial (16%)
Length = 391
Score = 285 bits (144), Expect = 4e-76
Identities = 192/208 (92%)
Strand = Plus / Plus
Query: 389 agaggatgaaaattgctcaactgaaacaaatttgctcaagacctgatgttgttgaggtgt 448
||||||||||||||||| |||||||||| ||||||||||| ||| |||||||||||| ||
Sbjct: 184 agaggatgaaaattgctgaactgaaacatatttgctcaaggccttatgttgttgaggcgt 243
Query: 449 gggatgctactgcattagacccaaagttgcttgtgtttttcaaatcttataggaatactg 508
||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 244 gggatgctactgcatcagacccaaagttgctggtgtttttgaaatcttataggaatactg 303
Query: 509 taccagtgcctaggcattggagtcagaagagaaattttttgcaagggaaacgaggtattc 568
|||| |||||||| |||||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 304 tacctgtgcctagacattggagtcagaagagaaagtttttgcagggggaacgaggtatcg 363
Query: 569 agaaacaaccctttcagcttcctcattt 596
||||||||||||||||||||||| ||||
Sbjct: 364 agaaacaaccctttcagcttcctgattt 391
>gnl|LJGI|TC78197 similar to UniRef100_A2Q200 Cluster: PSP, proline-rich; n=1;
Medicago truncatula|Rep: PSP, proline-rich - Medicago
truncatula (Barrel medic), partial (9%)
Length = 538
Score = 131 bits (66), Expect = 2e-29
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 443 aggtgtgggatgctactgcattagacccaaagttgcttgtgtttttcaaatcttatagga 502
||||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||| |
Sbjct: 223 aggtgtgggatgctactgcatcagacccaaagttgctggggtttttgaaatcttatagca 282
Query: 503 atactgtaccagtgcctaggcattggagtcagaagaga 540
|||| ||||| ||||||||||||||||||||||||||
Sbjct: 283 ataccgtacctatgcctaggcattggagtcagaagaga 320
>gnl|LJGI|BP049935 similar to UniRef100_Q9SVT1 Cluster: Spliceosome associated
protein-like; n=1; Arabidopsis thaliana|Rep: Spliceosome
associated protein-like - Arabidopsis thaliana
(Mouse-ear cress), partial (8%)
Length = 425
Score = 127 bits (64), Expect = 2e-28
Identities = 88/96 (91%)
Strand = Plus / Minus
Query: 445 gtgtgggatgctactgcattagacccaaagttgcttgtgtttttcaaatcttataggaat 504
||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||| |||
Sbjct: 300 gtgtgggatgctactgcatcagacccaaagttgctggggtttttgaaatcttatagcaat 241
Query: 505 actgtaccagtgcctaggcattggagtcagaagaga 540
|| ||||| ||||||||||||||||||||||||||
Sbjct: 240 accgtacctatgcctaggcattggagtcagaagaga 205