Miyakogusa Predicted Gene
- Lj0g3v0332399.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0332399.1 tr|B9MTJ8|B9MTJ8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_589523 PE=4
SV=1,58.23,4e-17,coiled-coil,NULL; seg,NULL,CUFF.22664.1
(747 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72567 weakly similar to UniRef100_A7PF32 Cluster: Chr... 700 0.0
gnl|LJGI|BP075609 weakly similar to UniRef100_A7PF32 Cluster: Ch... 414 e-115
>gnl|LJGI|TC72567 weakly similar to UniRef100_A7PF32 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 546
Score = 700 bits (353), Expect = 0.0
Identities = 368/373 (98%)
Strand = Plus / Plus
Query: 375 gtctctgtcatctgcagataacatacaaaaaaggagatacattgcgatggtagaaatgtg 434
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 1 gtctctgtcatctgcagataacataccaaaaaggagataccttgcgatggtagaaatgtg 60
Query: 435 tcgagttgttgctagtagggatcggttaatcattctactactcccacttttggaacatgt 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgagttgttgctagtagggatcggttaatcattctactactcccacttttggaacatgt 120
Query: 495 cctaaatatcatcctcatccatcttcagaacagctctattgcacttgatcctgccatgag 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctaaatatcatcctcatccatcttcagaacagctctattgcacttgatcctgccatgag 180
Query: 555 cacaaaaacaattacatatagttcaaagtgtgatccacaacaggatatggctttgttttg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacaaaaacaattacatatagttcaaagtgtgatccacaacaggatatggctttgttttg 240
Query: 615 tgggaagttagttccaactcttgaaagactcgagttgctgagtgaggagaaaatagggca 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgggaagttagttccaactcttgaaagactcgagttgctgagtgaggagaaaatagggca 300
Query: 675 caatctcaaagtattccaaagattaactacttctgccaaagagattgcaatacaaaagtt 734
||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 301 caatctcaaagtattcccaagattaactacttctgcccaagagattgcaataccaaagtt 360
Query: 735 gattttgtagata 747
|||||||||||||
Sbjct: 361 gattttgtagata 373
>gnl|LJGI|BP075609 weakly similar to UniRef100_A7PF32 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 454
Score = 414 bits (209), Expect = e-115
Identities = 242/253 (95%)
Strand = Plus / Minus
Query: 495 cctaaatatcatcctcatccatcttcagaacagctctattgcacttgatcctgccatgag 554
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 454 cctaaatatcatcctcatccatcttcagtacagctctattgcacttgatcctgccatgac 395
Query: 555 cacaaaaacaattacatatagttcaaagtgtgatccacaacaggatatggctttgttttg 614
||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 caccaacaccattacatatagttcaaagtgtgatccacaacaggatatggctttgttttg 335
Query: 615 tgggaagttagttccaactcttgaaagactcgagttgctgagtgaggagaaaatagggca 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgggaagttagttccaactcttgaaagactcgagttgctgagtgaggagaaaatagggca 275
Query: 675 caatctcaaagtattccaaagattaactacttctgccaaagagattgcaatacaaaagtt 734
||||||||||||||||||| | |||||||||||||| ||||||||||||||| |||| |
Sbjct: 274 caatctcaaagtattccaagcactaactacttctgcctaagagattgcaataccaaagct 215
Query: 735 gattttgtagata 747
|||||||||||||
Sbjct: 214 gattttgtagata 202