Miyakogusa Predicted Gene
- Lj0g3v0332349.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0332349.1 tr|I1K037|I1K037_SOYBN Histone deacetylase
OS=Glycine max PE=3 SV=1,86.76,0,Arginase/deacetylase,NULL;
HISDACETLASE,Histone deacetylase; HDASUPER,Histone deacetylase
superfamil,gene.g25944.t1.1
(1068 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59998 homologue to UniRef100_A7PCT8 Cluster: Chromoso... 1124 0.0
gnl|LJGI|TC59692 similar to UniRef100_A7PCT8 Cluster: Chromosome... 285 3e-76
gnl|LJGI|TC67123 similar to UniRef100_Q9ZTP8 Cluster: Histone de... 135 6e-31
gnl|LJGI|TC79913 similar to UniRef100_Q9FML2 Cluster: Histone de... 86 5e-16
gnl|LJGI|TC60853 similar to UniRef100_A8MSD0 Cluster: Uncharacte... 78 1e-13
>gnl|LJGI|TC59998 homologue to UniRef100_A7PCT8 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (64%)
Length = 774
Score = 1124 bits (567), Expect = 0.0
Identities = 669/703 (95%)
Strand = Plus / Plus
Query: 1 atggttatggaggaggagagaaagatagaggaaggtgcttcccttccatcgggaccagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atggttatggaggaggagagaaagatagaggaaggtgcttcccttccatcgggaccagac 131
Query: 61 gcgaagaagaagagagtcacctacttctacgaaccatcaatcggtgattactactacggc 120
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 132 gcgaagaagaagagagtcacctacttctacgaaccatcgatcggcgattactactacggc 191
Query: 121 caaggccacccgatgaaaccccaccgtatgcgtatggcccacaatctcatcgtctattac 180
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 192 caaggccacccgatgaaaccccaccggatgcgtatggcccacaatctcatcgtccattac 251
Query: 181 tccctccaccgccgcatggagatcaaccgccccttccccgccggccctgatgacatccgc 240
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 252 tccctccaccgccgcatggagatcaatcgccccttccccgccggccctgacgacatccgc 311
Query: 241 cgcttccactccgacgactacgttgacttccttgcctctgtcacccctgagaccctctct 300
||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||
Sbjct: 312 cgcttccactccgacgactacgtcgagtttcttgcctctgtcacccctgagactctctcg 371
Query: 301 gagccaatcttcgcccgccagctcaagcgcttcaatgttggtgatgactgtcctatcttt 360
||||||||||||||||||||||| ||||||||||| |||||||| || |||||||| |||
Sbjct: 372 gagccaatcttcgcccgccagcttaagcgcttcaacgttggtgaggattgtcctattttt 431
Query: 361 gatggtctgtttaattactgccaggcctccgctggtggctccctcggcgccgccgtcaag 420
|||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 432 gatggtcttttcaattactgccaggcctccgccggtggctccctcggcgccgccgtcaag 491
Query: 421 ctcaaccgcggtgaagctgacattgctattaattgggctgggggcatgcaccatgctaag 480
|||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 492 ctcaaccgcggtgaggctgacattgctatcaattgggctgggggcatgcatcatgctaag 551
Query: 481 aagtgtgaagcttctggcttctgttacgttaatgacattgttcttggtatcctcgagctt 540
|||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 552 aagtgtgaagcttctggcttctgttatgtcaatgacattgtgcttggtatcctcgagctt 611
Query: 541 ctcaaagttcacaggcgtgtgctgtacattgacattgatgttcaccatggtgatggtgtc 600
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 612 ctcaaagttcataggcgtgtgctgtacattgacatagatgttcaccatggtgatggtgtg 671
Query: 601 gaggaggccttttacacaactgatagagtgatgacagtatctttccacaagtttggggac 660
|| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 672 gaagaggccttctacacaactgatagagtgatgacagtatctttccataagtttggggac 731
Query: 661 tttttccctggcactggacacattaaagacattggagtgggct 703
|||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 732 tttttccccggcactggacacatcaaggacattggagtgggct 774
>gnl|LJGI|TC59692 similar to UniRef100_A7PCT8 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 816
Score = 285 bits (144), Expect = 3e-76
Identities = 494/611 (80%), Gaps = 6/611 (0%)
Strand = Plus / Plus
Query: 79 acctacttctacgaaccatcaatcggtgattactactacggccaaggccacccgatgaaa 138
||||| ||||||||||| |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 183 acctatttctacgaaccccaaatcggcgactactactacggccaaggccacccaatgaaa 242
Query: 139 ccccaccgtatgcgtatggcccacaatctcatcgtctattactccctccaccgccgcatg 198
|| ||| | || || ||||| ||| | |||||| || | ||||||||| ||||||||||
Sbjct: 243 ccgcacagaatccgcatggcgcacgagctcatcatcaactactccctcttccgccgcatg 302
Query: 199 gagatcaaccgccccttccccgccggccctgatgacatccgccgcttccactccgacgac 258
|||||||||| || | |||||||| | || |||||| ||||||| ||||||||||||
Sbjct: 303 cagatcaaccgtccataccccgccgccgtcgaggacatctgccgctttcactccgacgac 362
Query: 259 tacgttgacttccttgcctctgtcacccctgagaccctctctgagccaatcttcgc---- 314
||||| |||||||| ||||| ||| | || || | |||||| ||||| | | | |
Sbjct: 363 tacgtcgacttcctcgcctccgtctcgccggaaatcctctccgagcccacccactctcac 422
Query: 315 --ccgccagctcaagcgcttcaatgttggtgatgactgtcctatctttgatggtctgttt 372
||||||||||||||||| ||| || ||||| ||||||||| | || || || || ||
Sbjct: 423 taccgccagctcaagcgctacaacgtcggtgaggactgtcctgttttcgacggactcttc 482
Query: 373 aattactgccaggcctccgctggtggctccctcggcgccgccgtcaagctcaaccgcggt 432
||| ||||||||| ||||| ||||| ||| ||||||||||||||| |||||||| |
Sbjct: 483 gatttctgccaggcttccgccggtggatccatcggcgccgccgtcacgctcaaccactcc 542
Query: 433 gaagctgacattgctattaattgggctgggggcatgcaccatgctaagaagtgtgaagct 492
|| ||||| || || || ||||| || ||| |||||||||| |||||| ||| ||
Sbjct: 543 ctcgccgacatcgcgatcaactgggccggtggcttgcaccatgcgaagaaggctgaggcc 602
Query: 493 tctggcttctgttacgttaatgacattgttcttggtatcctcgagcttctcaaagttcac 552
||||| || || ||||| |||||||| || || || || |||||||||||||| ||||||
Sbjct: 603 tctgggttttgctacgtcaatgacatcgtcctgggaattctcgagcttctcaaggttcac 662
Query: 553 aggcgtgtgctgtacattgacattgatgttcaccatggtgatggtgtcgaggaggccttt 612
|||||||||||||| |||| ||||||||||||||||| ||||| || |||||||| ||
Sbjct: 663 aggcgtgtgctgtatgttgatattgatgttcaccatggagatggcgttgaggaggcattc 722
Query: 613 tacacaactgatagagtgatgacagtatctttccacaagtttggggactttttccctggc 672
||||| |||||||||||||||||||| || || |||||||| ||| | |||||||| ||
Sbjct: 723 tacactactgatagagtgatgacagtgtcatttcacaagttcgggaattttttcccagga 782
Query: 673 actggacacat 683
||||| |||||
Sbjct: 783 actgggcacat 793
>gnl|LJGI|TC67123 similar to UniRef100_Q9ZTP8 Cluster: Histone deacetylase; n=2; Zea
mays|Rep: Histone deacetylase - Zea mays (Maize),
partial (27%)
Length = 927
Score = 135 bits (68), Expect = 6e-31
Identities = 101/112 (90%)
Strand = Plus / Plus
Query: 885 gaaagggcatgcagattgtcttcgtttcgttagatctttcaatgttcctctcatggtcgt 944
|||||| ||||||||||| ||||||||||||| |||||||||||||||||| ||| | ||
Sbjct: 1 gaaaggtcatgcagattgccttcgtttcgttaaatctttcaatgttcctctaatgattgt 60
Query: 945 gggtggtggaggatatacaattcggaatgtcgctcgctgttggtgttatgag 996
||||| ||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 61 tggtggcggaggatatacgattcggaatgtggctcgttgttggtgttatgag 112
>gnl|LJGI|TC79913 similar to UniRef100_Q9FML2 Cluster: Histone deacetylase 6; n=1;
Arabidopsis thaliana|Rep: Histone deacetylase 6 -
Arabidopsis thaliana (Mouse-ear cress), partial (24%)
Length = 366
Score = 85.7 bits (43), Expect = 5e-16
Identities = 106/127 (83%)
Strand = Plus / Plus
Query: 870 cttcaacttgtcagtgaaagggcatgcagattgtcttcgtttcgttagatctttcaatgt 929
|||||||||||| ||||| || ||||||||||| ||||| ||| ||||||||| ||||||
Sbjct: 9 cttcaacttgtctgtgaagggtcatgcagattgccttcgcttccttagatcttacaatgt 68
Query: 930 tcctctcatggtcgtgggtggtggaggatatacaattcggaatgtcgctcgctgttggtg 989
||||| ||| || ||||||| |||||||| || | |||| || ||||| || |||||
Sbjct: 69 ccctctaatgctcttgggtgggggaggatacacggtccggagcgttgctcgatgctggtg 128
Query: 990 ttatgag 996
|||||||
Sbjct: 129 ttatgag 135
>gnl|LJGI|TC60853 similar to UniRef100_A8MSD0 Cluster: Uncharacterized protein
At4g38130.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At4g38130.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (80%)
Length = 1708
Score = 77.8 bits (39), Expect = 1e-13
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 571 gacattgatgttcaccatggtgatggtgtcgaggaggccttttacacaactgatagagtg 630
||||||||| | |||||||| |||||||| ||||| || |||||||||||||| |||||
Sbjct: 711 gacattgatatccaccatggggatggtgtggaggaagctttttacacaactgacagagtt 770
Query: 631 atgacagtatctttccacaagtttggggactttttccctggcactgg 677
||||| || || ||||| || ||||| |||| ||| ||||| |||||
Sbjct: 771 atgaccgtttcattccataaatttggtgactattttcctggtactgg 817