Miyakogusa Predicted Gene
- Lj0g3v0332229.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0332229.2 tr|G8A123|G8A123_MEDTR Protein transport protein
SEC23 OS=Medicago truncatula GN=MTR_115s0021 PE=4 S,82.83,0,no
description,NULL; vWA-like,NULL; C-terminal, gelsolin-like domain of
Sec23/24,NULL; Helical domai,CUFF.22645.2
(2163 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO006809 similar to UniRef100_A7NX00 Cluster: Chromosom... 1370 0.0
gnl|LJGI|GO015615 similar to UniRef100_A7NX00 Cluster: Chromosom... 757 0.0
>gnl|LJGI|GO006809 similar to UniRef100_A7NX00 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 720
Score = 1370 bits (691), Expect = 0.0
Identities = 712/715 (99%), Gaps = 3/715 (0%)
Strand = Plus / Plus
Query: 1096 gatgcgaccattgaaatagtgaccactaaagatgtgaaaatttgtggagctcttggtcct 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatgcgaccattgaaatagtgaccactaaagatgtgaaaatttgtggagctcttggtcct 61
Query: 1156 tgtgtgtctcttagaaaaaacaacagtttggtaagtgagtccgaggttggacaaggtggt 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgtgtgtctcttagaaaaaacaacagtttggtaagtgagtccgaggttggacaaggtggt 121
Query: 1216 acctgcgtgtggaagttgaatacaatcactgacagaacttgcattgcctttttcttccaa 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acctgcgtgtggaagttgaatacaatcactgacagaacttgcattgcctttttcttccaa 181
Query: 1276 gtgaatgatgagcagaaagttcaacccggctctgcctttctgattcagtttatcacacgg 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtgaatgatgagcagaaagttcaacccggctctgcctttctgattcagtttatcacacgg 241
Query: 1336 tacaggcaggggaacatggggcctcgaaaacgagtcaccactgctgctagacgatgggtt 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tacaggcaggggaacatggggcctcgaaaacgagtcaccactgctgctagacgatgggtt 301
Query: 1396 gcaagtgattccactgatattgctgctggctttgatcaagaagccgcagcttcagttatg 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcaagtgattccactgatattgctgctggctttgatcaagaagccgcagcttcagttatg 361
Query: 1456 gcaagacttgctattctcagggcagagacatgctatgctcgagatgtcattagatggctt 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcaagacttgctattctcagggcagagacatgctatgctcgagatgtcattagatggctt 421
Query: 1516 gatgaccaactaattcgtttttcatccaagtttggggactatgtgccagaagatccttct 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gatgaccaactaattcgtttttcatccaagtttggggactatgtgccagaagatccttct 481
Query: 1576 tccttccgcttatcttccatcttttccctttatcctcagtttatgttccacttgaggcga 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 482 tccttccgcttatcttccatcttttccctttatcctcagtttatgttccacttga-gcga 540
Query: 1636 tctcaatttattgacgtgtctaacactactcctgatgaaactgcatattt-ccgggttat 1694
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 541 tctcaatttattgacgtgtctaacactactcctgatgaaactgcatatttcccgggttat 600
Query: 1695 gctgaaccgtgagggtgtagttggttctcttataatgattcaacctacactgttccaata 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gctgaaccgtgagggtgtagttggttctcttataatgattcaacctacactgttccaata 660
Query: 1755 ttcttttgatgggccacctgttccagtactccttgacattcgttctatttgtccg 1809
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttc-tttgatgggccacctgttccagtactccttgacattcgttctatttgtccg 714
>gnl|LJGI|GO015615 similar to UniRef100_A7NX00 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (17%)
Length = 555
Score = 757 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Minus
Query: 1782 actccttgacattcgttctatttgtccggattccatcttgctctttgattctttcttcca 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 actccttgacattcgttctatttgtccggattccatcttgctctttgattctttcttcca 496
Query: 1842 tgttgtgattcattatgggtccaaggtcactcactggaggaaggtcggttatgataagga 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tgttgtgattcattatgggtccaaggtcactcactggaggaaggtcggttatgataagga 436
Query: 1902 cccaaatcatgagaactttagaaagctgctggaagccccagaactggatgcagagcaatt 1961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cccaaatcatgagaactttagaaagctgctggaagccccagaactggatgcagagcaatt 376
Query: 1962 ggtggctgaacgggttccagtgccgaaatttataagatgtgaccagtatagtagtcaagc 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggtggctgaacgggttccagtgccgaaatttataagatgtgaccagtatagtagtcaagc 316
Query: 2022 taggtttcttcttgccaaattgaatccatctgttactcaaaattcaacttacacagaagg 2081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 taggtttcttcttgccaaattgaatccatctgttactcaaaattcaacttacacagaagg 256
Query: 2082 ttcggatattatcttcaccgatgatttgagcttagaaatttttctagatcaattgcaggt 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttcggatattatcttcaccgatgatttgagcttagaaatttttctagatcaattgcaggt 196
Query: 2142 actggcagtgcaaggctgataa 2163
||||||||||||||||||||||
Sbjct: 195 actggcagtgcaaggctgataa 174