Miyakogusa Predicted Gene
- Lj0g3v0332169.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0332169.2 tr|G7LGN1|G7LGN1_MEDTR ABC transporter family
pleiotropic drug resistance protein OS=Medicago
trunca,87.33,0,seg,NULL; ATP-BINDING CASSETTE TRANSPORTER (PDR),NULL;
ATP-BINDING CASSETTE TRANSPORTER,NULL; no des,CUFF.22648.2
(2262 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP057421 similar to UniRef100_A7P746 Cluster: Chromosom... 1039 0.0
gnl|LJGI|TC75801 similar to UniRef100_A7P746 Cluster: Chromosome... 777 0.0
gnl|LJGI|BP042918 similar to UniRef100_A7P746 Cluster: Chromosom... 587 e-166
gnl|LJGI|AV410765 weakly similar to UniRef100_Q5Z9S8 Cluster: Pl... 228 1e-58
gnl|LJGI|BP075566 similar to UniRef100_A7P746 Cluster: Chromosom... 208 1e-52
gnl|LJGI|TC69817 weakly similar to UniRef100_A7P735 Cluster: Chr... 198 1e-49
gnl|LJGI|DC596186 143 6e-33
gnl|LJGI|FS337921 weakly similar to UniRef100_A7P735 Cluster: Ch... 109 8e-23
gnl|LJGI|TC74814 similar to UniRef100_Q7PC86 Cluster: Probable p... 100 7e-20
>gnl|LJGI|BP057421 similar to UniRef100_A7P746 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (21%)
Length = 547
Score = 1039 bits (524), Expect = 0.0
Identities = 540/543 (99%), Gaps = 2/543 (0%)
Strand = Plus / Plus
Query: 630 tttgttagcattggctggaaaattggatcatgaattgagggtaacaggagaaatcactta 689
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7 tttgttagcat-ggctggaaaat-ggatcatgaattgagggtaacaggagaaatcactta 64
Query: 690 taatgggcacaagcttaatgaatttgttccaagaaagactgcagcatacatcagccaaaa 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 taatgggcacaagcttaatgaatttgttccaagaaagactgcagcatacatcagccaaaa 124
Query: 750 cgatgttcatgttggagaaatgactgtgaaagaaaccctggatttctcagctagatgcca 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cgatgttcatgttggagaaatgactgtgaaagaaaccctggatttctcagctagatgcca 184
Query: 810 aggggttgggactagatatgatttgctgagtgagcttggtagaagggaaaaggaagctgg 869
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 185 aggggttgggactagatatgattngctgagtgagcttggtagaagggaaaaggaagctgg 244
Query: 870 tatattccctgaggcagaacttgaccttttcatgaaggctactgcactgaaaggaacaga 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tatattccctgaggcagaacttgaccttttcatgaaggctactgcactgaaaggaacaga 304
Query: 930 aagcagtctcattactgactatactcttaaaatattggggcttgatatttgcaaggacac 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aagcagtctcattactgactatactcttaaaatattggggcttgatatttgcaaggacac 364
Query: 990 catagtgggagatgaaatgcacagaggtgtatctggtggccaaaagaagcgtgtgaccac 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 catagtgggagatgaaatgcacagaggtgtatctggtggccaaaagaagcgtgtgaccac 424
Query: 1050 aggagagatgatcgtggggcccacaaagacattgtttatggatgagatatcaacgggtct 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aggagagatgatcgtggggcccacaaagacattgtttatggatgagatatcaacgggtct 484
Query: 1110 tgatagttccacaacatttcaaattgtgaaatgcttgcagcagattgtgcacctcactga 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgatagttccacaacatttcaaattgtgaaatgcttgcagcagattgtgcacctcactga 544
Query: 1170 agg 1172
|||
Sbjct: 545 agg 547
>gnl|LJGI|TC75801 similar to UniRef100_A7P746 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 771
Score = 777 bits (392), Expect = 0.0
Identities = 555/610 (90%), Gaps = 12/610 (1%)
Strand = Plus / Plus
Query: 3 gatggatgggaatttaagcaggagcattagcaggagcttgagcaggtcaagctggagaat 62
||||||| |||||||||||||||||| || | ||||||||| ||||||||||||| ||
Sbjct: 174 gatggatacgaatttaagcaggagcataagtaagagcttgagtaggtcaagctggaagat 233
Query: 63 ggaggaagtgtttgcgagtggaagatactctcgcaggtcttctaatgttgatgaagatga 122
||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||
Sbjct: 234 ggaagaagtgtttgcgagtggtagatactctcgcagggcttctcatgttgatgaagatga 293
Query: 123 agaagctctcaaatgggctgccattgagaaactacccacctatgacaggcttagaacgag 182
||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 294 agaagctctgaaatgggctgctattgagaaactacccacctatgacaggctcagaaccag 353
Query: 183 tatcatccaaaccattgctgagggtggtgatctgcctcaaggtggtggtggaggaaacag 242
|||||| ||||| ||||| ||||||| ||| ||||||||| |||||||||
Sbjct: 354 tatcattcaaacgattgcagagggtg---atcagcctcaagg---------aggaaacag 401
Query: 243 gatgcagcacaaggaagttgatgtcacaaagcttgatatgaatgataggcaacagatcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gatgcagcacaaggaagttgatgtcacaaagcttgatatgaatgataggcaacagatcat 461
Query: 303 tgaccaaatcttcaaggttgctgaagaagataatgaaaagtttctcagaaagtttagaaa 362
|||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 462 tgacaaaatcttcaaggttgctgaagaagataatgaaaagtatctcagaaagttcagaaa 521
Query: 363 cagaactgacaaagttgggatcagacttccaactgtggaagtgaggttcaagaatttgac 422
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cagaaccgacaaggttgggatcagacttccaactgtggaagtgaggttcaagaatttgac 581
Query: 423 tattgaggctgattcctatgttggcggcagagctttgccaacactaccaaactccgcatt 482
|||||| |||||||||||||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 582 tattgatgctgattcctatgttggcagcagagctttgccaaccctaccaaactctgcatt 641
Query: 483 gaacattgtagaatcacttctcggcgcctgtgggattagtactacgaagagaacaaagct 542
||||||| ||||||||||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 642 gaacattatagaatcacttcttggcgcgtgtgggattagtaccgcgaagcaaacaaagct 701
Query: 543 cacagttcttaagaatgtctctggcattgtaaaacctgggaggatggcccttttgctagg 602
|||| ||||||||||| | ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 702 cacaattcttaagaatatgtctggcattgttaaacccggaaggatggcccttttgctagg 761
Query: 603 tccgccttct 612
||| ||||||
Sbjct: 762 tccaccttct 771
>gnl|LJGI|BP042918 similar to UniRef100_A7P746 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 412
Score = 587 bits (296), Expect = e-166
Identities = 383/412 (92%)
Strand = Plus / Minus
Query: 1781 tcaccattcagaggcttcctgtgttttacaaacacagggatcaccttttccaccctgctt 1840
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 412 tcaccattcagaggcttcctgtgttttacaagcacagggatcaccttttccaccctgctt 353
Query: 1841 ggacttacacgcttcctaacttcctgttgaagatccccatttctgtgtttgagtctcttg 1900
|||||||||| | ||||| |||||||||| ||||||||||||| | |||||||||||||
Sbjct: 352 ggacttacactgtccctaatttcctgttgaggatccccatttctatatttgagtctcttg 293
Query: 1901 tttgggtgcttgttacctactacacaataggatttgcacctgaagctagcaggttcttca 1960
|||||||| | ||||||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 292 tttgggtggctattacctactacactacagggtttgcacctgaagctagcaggttcttca 233
Query: 1961 agcaactgttggtggtgtttcttatccaacaaatggcagctgggatgtttagggtcattt 2020
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 232 agcaactgttggtggtgtttcttatccaacaaatggcagcggggatgtttaggctcattt 173
Query: 2021 ctggagtttgcaggacaatgatcattgctaatactggaggagcactcatgcttcttctcg 2080
||||||| ||||| |||||||| |||||||||||||| ||||| || ||||| ||||| |
Sbjct: 172 ctggagtctgcagaacaatgattattgctaatactggtggagctcttatgctccttcttg 113
Query: 2081 tttttctactaggaggtttcctccttcccaaacgtgaaattcctgactggtgggtgtggg 2140
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 112 tttttctactaggaggtttcctccttccaaaacgtgcaattcctgactggtgggtgtggg 53
Query: 2141 cctactgggtttcaccattgtcatatgctttcaatgccttgactgtgaatga 2192
|||||||| ||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 52 cctactggatttcacccttgtcatatgctttcaattccttgactgtgaatga 1
>gnl|LJGI|AV410765 weakly similar to UniRef100_Q5Z9S8 Cluster: Pleiotropic drug
resistance protein 12; n=1; Oryza sativa Japonica
Group|Rep: Pleiotropic drug resistance protein 12 - Oryza
sativa subsp. japonica (Rice), partial (4%)
Length = 167
Score = 228 bits (115), Expect = 1e-58
Identities = 154/167 (92%)
Strand = Plus / Plus
Query: 1457 ttggtgttcagcttgagaacgagctatctgtcccatttgacaagtcaaatgcacacaaag 1516
||||||||||||| |||| |||| |||| || ||||| |||||||||| |||||||||||
Sbjct: 1 ttggtgttcagctagagagcgagttatcagtgccattcgacaagtcaagtgcacacaaag 60
Query: 1517 catcactagtttacaccaaaaactctgtgcccacaaaggatcttctcaaagcatgttggg 1576
|| ||||||||||||||||||||||||| |||||||||||| || |||||||||||||||
Sbjct: 61 cagcactagtttacaccaaaaactctgttcccacaaaggatattttcaaagcatgttggg 120
Query: 1577 acaaggagtggcttctgatccagaggaactcttttgtctacattttc 1623
||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 121 acaaggagtggcttctgatccagaggaactccttcgtctacattttc 167
>gnl|LJGI|BP075566 similar to UniRef100_A7P746 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 253
Score = 208 bits (105), Expect = 1e-52
Identities = 172/192 (89%), Gaps = 2/192 (1%)
Strand = Plus / Minus
Query: 884 cagaacttgaccttttcatgaaggcta-ctgcactgaaaggaacagaaagcagtctcatt 942
|||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 217 cagaacctgaccttttcatgaaggctaactgntgtgaaaggaacagaaaccagtctcatt 158
Query: 943 actgactatactcttaaaatattggggcttgatatttgcaaggacaccatagtgggagat 1002
|||||||||||||| | | | ||||||||||||||||| ||||||||| | ||||||||
Sbjct: 157 actgactatactctcacacttttggggcttgatatttgtaaggacacccttctgggagat 98
Query: 1003 gaaatgcacagaggtg-tatctggtggccaaaagaagcgtgtgaccacaggagagatgat 1061
|| ||||||||||||| | ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 97 gatatgcacagaggtgctttctggtggccagaagaagcgtgtgaccacaggtgagatgat 38
Query: 1062 cgtggggcccac 1073
|||||||||||
Sbjct: 37 tgtggggcccac 26
>gnl|LJGI|TC69817 weakly similar to UniRef100_A7P735 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 999
Score = 198 bits (100), Expect = 1e-49
Identities = 166/188 (88%)
Strand = Plus / Plus
Query: 391 ccaactgtggaagtgaggttcaagaatttgactattgaggctgattcctatgttggcggc 450
|||||||||||||| |||| |||||||||||||| ||| |||||||||||||||| ||
Sbjct: 42 ccaactgtggaagtaaggtaaaagaatttgactatcgagtctgattcctatgttggtagc 101
Query: 451 agagctttgccaacactaccaaactccgcattgaacattgtagaatcacttctcggcgcc 510
|||||||||||||| |||||||| || |||||||||||||||||| |||||| || |||
Sbjct: 102 agagctttgccaaccctaccaaattctgcattgaacattgtagaaatacttcttggtgcc 161
Query: 511 tgtgggattagtactacgaagagaacaaagctcacagttcttaagaatgtctctggcatt 570
| ||||||||||||| | |||||| ||||||||| | ||||||||||||||||| |||||
Sbjct: 162 tatgggattagtactgctaagagagcaaagctcataattcttaagaatgtctctagcatt 221
Query: 571 gtaaaacc 578
|| |||||
Sbjct: 222 gttaaacc 229
>gnl|LJGI|DC596186
Length = 308
Score = 143 bits (72), Expect = 6e-33
Identities = 139/162 (85%), Gaps = 7/162 (4%)
Strand = Plus / Plus
Query: 390 tccaactgtggaagtgaggttcaagaatttgactattgaggctgattcctatgttggcgg 449
||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| | |
Sbjct: 34 tccaactgtggaagtgatgctcaagaatttgactattgaggttgattcctatgttgtcag 93
Query: 450 ca-------gagctttgccaacactaccaaactccgcattgaacattgtagaatcacttc 502
|| |||||||||||| ||||||| ||| |||||||||||||||||| |||||
Sbjct: 94 cactcagcagagctttgccaaacctaccaagctctgcattgaacattgtagaaatacttc 153
Query: 503 tcggcgcctgtgggattagtactacgaagagaacaaagctca 544
| || |||||||||||||||||| | | ||||||||||||||
Sbjct: 154 ttggtgcctgtgggattagtactgctacgagaacaaagctca 195
>gnl|LJGI|FS337921 weakly similar to UniRef100_A7P735 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 711
Score = 109 bits (55), Expect = 8e-23
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 390 tccaactgtggaagtgaggttcaagaatttgactattgaggctgattcctatgttggcgg 449
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| | |
Sbjct: 478 tccaactgtggaagtgaggctcaagaatttgactattgaggttgattcctatgttgtcag 537
Query: 450 cagagctttgccaacactaccaa 472
|| ||||||||||| |||||||
Sbjct: 538 caaagctttgccaaacctaccaa 560
>gnl|LJGI|TC74814 similar to UniRef100_Q7PC86 Cluster: Probable pleiotropic drug
resistance protein 7; n=1; Arabidopsis thaliana|Rep:
Probable pleiotropic drug resistance protein 7 -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 548
Score = 99.6 bits (50), Expect = 7e-20
Identities = 125/150 (83%)
Strand = Plus / Plus
Query: 4 atggatgggaatttaagcaggagcattagcaggagcttgagcaggtcaagctggagaatg 63
||||| ||| |||| ||||| ||||| |||||||| |||||||| |||| |||||||||
Sbjct: 270 atggaaggggatttgagcagaagcataagcaggagtttgagcagaacaagttggagaatg 329
Query: 64 gaggaagtgtttgcgagtggaagatactctcgcaggtcttctaatgttgatgaagatgaa 123
|||||||||||||| ||||| || || ||| | ||| |||| | |||| |||| ||||||
Sbjct: 330 gaggaagtgtttgcaagtgggaggtattctagaaggacttcaagtgttaatgaggatgaa 389
Query: 124 gaagctctcaaatgggctgccattgagaaa 153
|| ||||| | ||||||||||| ||||||
Sbjct: 390 gaggctctgaggtgggctgccatagagaaa 419