Miyakogusa Predicted Gene
- Lj0g3v0331839.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0331839.1 tr|F2EAE0|F2EAE0_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,52.48,3e-19,seg,NULL; adh_short,Short-chain
dehydrogenase/reductase SDR; no description,NAD(P)-binding domain;
F,CUFF.22629.1
(465 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70297 similar to UniRef100_P28643 Cluster: 3-oxoacyl-... 888 0.0
gnl|LJGI|TC79064 similar to UniRef100_A7QBQ9 Cluster: Chromosome... 511 e-144
gnl|LJGI|FS323903 similar to UniRef100_A7QBQ9 Cluster: Chromosom... 170 5e-42
>gnl|LJGI|TC70297 similar to UniRef100_P28643 Cluster:
3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast
precursor; n=1; Cuphea lanceolata|Rep:
3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast
precursor - Cuphea lanceolata, partial (83%)
Length = 1396
Score = 888 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Plus
Query: 1 atggcttctctcaccgcatctaactgcgccgctctcagaaccgttaacttcgccgccgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atggcttctctcaccgcatctaactgcgccgctctcagaaccgttaacttcgccgccgct 178
Query: 61 aaccgtaaaatcgctcagatccgtcaatggtctccgattctcacccatctccgccccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aaccgtaaaatcgctcagatccgtcaatggtctccgattctcacccatctccgccccctc 238
Query: 121 tctggtctccgatgcggatccaaccattcgtttagctcctcctcctccggcgtgagagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tctggtctccgatgcggatccaaccattcgtttagctcctcctcctccggcgtgagagca 298
Query: 181 caggttgctactctggagcaagcgggaaccggagcaccttcgaaagtggatgcgccggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 caggttgctactctggagcaagcgggaaccggagcaccttcgaaagtggatgcgccggtt 358
Query: 241 gttgttgtaaccggagcttccagaggtattggccgagccattgcgctctcgttggggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gttgttgtaaccggagcttccagaggtattggccgagccattgcgctctcgttggggaaa 418
Query: 301 gcgggttgcaaggtccttgtcaactatgcaaggtcatccgaggaagcagaagaggtttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcgggttgcaaggtccttgtcaactatgcaaggtcatccgaggaagcagaagaggtttcc 478
Query: 361 aaagagattgaggcatttggtgggcaagctataacatttaagggaaatgtttcgaatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aaagagattgaggcatttggtgggcaagctataacatttaagggaaatgtttcgaatgag 538
Query: 421 gatgacgtggagtctatgattaaagctg 448
||||||||||||||||||||||||||||
Sbjct: 539 gatgacgtggagtctatgattaaagctg 566
>gnl|LJGI|TC79064 similar to UniRef100_A7QBQ9 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 475
Score = 511 bits (258), Expect = e-144
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 atggcttctctcaccgcatctaactgcgccgctctcagaaccgttaacttcgccgccgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atggcttctctcaccgcatctaactgcgccgctctcagaaccgttaacttcgccgccgct 277
Query: 61 aaccgtaaaatcgctcagatccgtcaatggtctccgattctcacccatctccgccccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaccgtaaaatcgctcagatccgtcaatggtctccgattctcacccatctccgccccctc 337
Query: 121 tctggtctccgatgcggatccaaccattcgtttagctcctcctcctccggcgtgagagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctggtctccgatgcggatccaaccattcgtttagctcctcctcctccggcgtgagagca 397
Query: 181 caggttgctactctggagcaagcgggaaccggagcaccttcgaaagtggatgcgccggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caggttgctactctggagcaagcgggaaccggagcaccttcgaaagtggatgcgccggtt 457
Query: 241 gttgttgtaaccggagct 258
||||||||||||||||||
Sbjct: 458 gttgttgtaaccggagct 475
>gnl|LJGI|FS323903 similar to UniRef100_A7QBQ9 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 718
Score = 170 bits (86), Expect = 5e-42
Identities = 195/230 (84%), Gaps = 6/230 (2%)
Strand = Plus / Plus
Query: 221 cgaaagtggatgcgccggttgttgttgtaaccggagcttccagaggtattggccgagcca 280
|||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||| |
Sbjct: 223 cgaaagtggacgcgccggttgtagttgtaaccggagcctccaggggtattggccgagcaa 282
Query: 281 ttgcgctctcgttggggaaagcgggttgcaaggtccttgtcaactatgcaaggt---cat 337
|||| ||| ||||||||||||| |||||||||||||||||| || ||||||||| |||
Sbjct: 283 ttgccctcacgttggggaaagcaggttgcaaggtccttgtccaccatgcaaggtggacat 342
Query: 338 ccgagga---agcagaagaggtttccaaagagattgaggcatttggtgggcaagctataa 394
|| |||| ||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 343 ccaaggatactgcagaggaggtttccaaagagattgagtttcttggtgggcaagctataa 402
Query: 395 catttaagggaaatgtttcgaatgaggatgacgtggagtctatgattaaa 444
| || ||| |||||||| |||| ||||||||| |||||| |||||
Sbjct: 403 cgttcgccggagatgtttcggatgaaactgacgtggaatctatggttaaa 452
Score = 99.6 bits (50), Expect = 1e-20
Identities = 85/96 (88%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 70 atcgctcagatccgtcaatggtctcc---gattctcacccatctccgccccctctctggt 126
|||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 114 atcgctcagatccgccaatggtctcctccgattctcacccatctctgcctcctctctggt 173
Query: 127 ctccgatgcggatccaaccattcgtttagctcctcc 162
|| | ||| ||||||||||||||||||||| ||||
Sbjct: 174 cttcactgcagatccaaccattcgtttagcttctcc 209