Miyakogusa Predicted Gene
- Lj0g3v0331549.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0331549.2 Non Chatacterized Hit- tr|F6GTI4|F6GTI4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.37,0,seg,NULL; Afi1,Arf3-interacting protein 1, N-terminal
domain; SPA,NULL; SUBFAMILY NOT NAMED,NULL; UN,CUFF.22594.2
(1803 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS353431 similar to UniRef100_A7PGP2 Cluster: Chromosom... 797 0.0
gnl|LJGI|TC58922 similar to UniRef100_A7PGP2 Cluster: Chromosome... 722 0.0
gnl|LJGI|TC62984 similar to UniRef100_A7PGP2 Cluster: Chromosome... 379 e-104
>gnl|LJGI|FS353431 similar to UniRef100_A7PGP2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 540
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Minus
Query: 1350 acacttcttggagctcacaacaaattttttggcacccttttccccatattttaggactac 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 acacttcttggagctcacaacaaattttttggcacccttttccccatattttaggactac 481
Query: 1410 aacaccattagaaggatcttctccttatgtagagcctccttccctacctccatttaatgc 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aacaccattagaaggatcttctccttatgtagagcctccttccctacctccatttaatgc 421
Query: 1470 cagtgagtttcttgcaagtttatctgcaagaggtccagggaaattcttattaaagcgaat 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cagtgagtttcttgcaagtttatctgcaagaggtccagggaaattcttattaaagcgaat 361
Query: 1530 gaggtctaactggcttgacttatacaggcgattcctgaatggacccaactttatgccatg 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaggtctaactggcttgacttatacaggcgattcctgaatggacccaactttatgccatg 301
Query: 1590 gtttcagagaaggcgtgctgctgccgaacaagaacaagatagattgtggaggcaagcaag 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtttcagagaaggcgtgctgctgccgaacaagaacaagatagattgtggaggcaagcaag 241
Query: 1650 aatgaaaactgacatagaacagcttatttctaaattgtctgagttggaaatagtggattc 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aatgaaaactgacatagaacagcttatttctaaattgtctgagttggaaatagtggattc 181
Query: 1710 cttcaatgttatagagagacttctcctcagagaagtgcaggt 1751
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cttcaatgttatagagagacttctcctcagagaagtgcaggt 139
>gnl|LJGI|TC58922 similar to UniRef100_A7PGP2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 796
Score = 722 bits (364), Expect = 0.0
Identities = 364/364 (100%)
Strand = Plus / Plus
Query: 1 atgagtaggtctccttcattttcagtgaaaacggaacttagtccgagtgttgttgactcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atgagtaggtctccttcattttcagtgaaaacggaacttagtccgagtgttgttgactcg 492
Query: 61 gaatcattgcaaagatgggttgttgctttttgtgctataaggtttgatctcgagcaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gaatcattgcaaagatgggttgttgctttttgtgctataaggtttgatctcgagcaagga 552
Query: 121 cagctcgtcgaagagtgttacccacagggatgtctttcccacgacgaagagcttgaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cagctcgtcgaagagtgttacccacagggatgtctttcccacgacgaagagcttgaaatc 612
Query: 181 gcttacagttccttccctgattccgtttcgcagaaccagaacaggtccagcattcatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gcttacagttccttccctgattccgtttcgcagaaccagaacaggtccagcattcatgat 672
Query: 241 tgtattttctttttccgaattcgcaggcgcagcagcaatgccaatggttctcaacctgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgtattttctttttccgaattcgcaggcgcagcagcaatgccaatggttctcaacctgcc 732
Query: 301 aaggatgctactgatgattgtaccgatgggccagaatacatgtatggttatgtgtttaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aaggatgctactgatgattgtaccgatgggccagaatacatgtatggttatgtgtttaac 792
Query: 361 aggc 364
||||
Sbjct: 793 aggc 796
>gnl|LJGI|TC62984 similar to UniRef100_A7PGP2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 1176
Score = 379 bits (191), Expect = e-104
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 1611 tgccgaacaagaacaagatagattgtggaggcaagcaagaatgaaaactgacatagaaca 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgccgaacaagaacaagatagattgtggaggcaagcaagaatgaaaactgacatagaaca 60
Query: 1671 gcttatttctaaattgtctgagttggaaatagtggattccttcaatgttatagagagact 1730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttatttctaaattgtctgagttggaaatagtggattccttcaatgttatagagagact 120
Query: 1731 tctcctcagagaagtgcaggtgcaacaatctggaaagggtggtgttgattccatggaaat 1790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctcctcagagaagtgcaggtgcaacaatctggaaagggtggtgttgattccatggaaat 180
Query: 1791 ttgtcagaaac 1801
|||||||||||
Sbjct: 181 ttgtcagaaac 191