Miyakogusa Predicted Gene
- Lj0g3v0331489.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0331489.1 Non Chatacterized Hit- tr|B9GAQ2|B9GAQ2_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,75.86,2e-17,Thymidylate synthase/dCMP
hydroxymethylase,Thymidylate synthase/dCMP hydroxymethylase domain;
thym_s,gene.g25872.t1.1
(624 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82097 similar to UniRef100_P51820 Cluster: Bifunction... 1098 0.0
gnl|LJGI|GO037366 homologue to UniRef100_P51820 Cluster: Bifunct... 638 0.0
gnl|LJGI|TC63097 similar to UniRef100_Q05763 Cluster: Bifunction... 571 e-162
>gnl|LJGI|TC82097 similar to UniRef100_P51820 Cluster: Bifunctional dihydrofolate
reductase-thymidylate synthase (DHFR-TS) [Includes:
Dihydrofolate reductase ; Thymidylate synthase ]; n=1;
Glycine max|Rep: Bifunctional dihydrofolate
reductase-thymidylate synthase (DHFR-TS) [Includes:
Dihydrofolate reductase ; Thymidylate synthase ] -
Glycine max (Soybean), partial (34%)
Length = 1154
Score = 1098 bits (554), Expect = 0.0
Identities = 554/554 (100%)
Strand = Plus / Plus
Query: 71 acttaggacctgtttatgggtttcagtggaggcactttggtgccaggtatagtgacatgc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttaggacctgtttatgggtttcagtggaggcactttggtgccaggtatagtgacatgc 60
Query: 131 ataaggactactccggccaaggatatgatcagcttttagatgttattaacaagataaagc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaggactactccggccaaggatatgatcagcttttagatgttattaacaagataaagc 120
Query: 191 ataatcctaatgatcgacgtatcattctctctgcatggaatccagttgatcttaaattga 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataatcctaatgatcgacgtatcattctctctgcatggaatccagttgatcttaaattga 180
Query: 251 tggcacttccaccctgccacatgtttgcacagttctttgtagcaaatggagaattatcat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggcacttccaccctgccacatgtttgcacagttctttgtagcaaatggagaattatcat 240
Query: 311 gtcaaatgtatcagcgatctgctgacatgggcctgggcgtgccatttaatattgcatctt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcaaatgtatcagcgatctgctgacatgggcctgggcgtgccatttaatattgcatctt 300
Query: 371 atgcgctcctgacatgcatgattgctcatgtttgtgaactcgttccaggtgatttcgtcc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgcgctcctgacatgcatgattgctcatgtttgtgaactcgttccaggtgatttcgtcc 360
Query: 431 atgttattggggatgcacatgtttaccacaatcatgtgcggcctttgcaggagcagcttc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgttattggggatgcacatgtttaccacaatcatgtgcggcctttgcaggagcagcttc 420
Query: 491 ttaacctacctaaaccttttcctactttgaagataaattcagagaagaaagatatagact 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttaacctacctaaaccttttcctactttgaagataaattcagagaagaaagatatagact 480
Query: 551 cttttgtagctgctgatttcaagcttgtaggctataatcctcaccagaagattgagatga 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttttgtagctgctgatttcaagcttgtaggctataatcctcaccagaagattgagatga 540
Query: 611 agatggcagtttaa 624
||||||||||||||
Sbjct: 541 agatggcagtttaa 554
>gnl|LJGI|GO037366 homologue to UniRef100_P51820 Cluster: Bifunctional dihydrofolate
reductase-thymidylate synthase (DHFR-TS) [Includes:
Dihydrofolate reductase ; Thymidylate synthase ]; n=1;
Glycine max|Rep: Bifunctional dihydrofolate
reductase-thymidylate synthase (DHFR-TS) [Includes:
Dihydrofolate reductase ; Thymidylate synthase ] -
Glycine max (Soybean), partial (34%)
Length = 702
Score = 638 bits (322), Expect = 0.0
Identities = 499/558 (89%)
Strand = Plus / Plus
Query: 66 gggtgacttaggacctgtttatgggtttcagtggaggcactttggtgccaggtatagtga 125
|||||||||||| ||||| |||||||||||||||||||||||||| || ||||||| | |
Sbjct: 1 gggtgacttagggcctgtctatgggtttcagtggaggcactttggcgctaggtatactaa 60
Query: 126 catgcataaggactactccggccaaggatatgatcagcttttagatgttattaacaagat 185
||||||| | |||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 61 catgcatgatgactactccggcaaaggatttgatcagcttttagatgttattaacaagat 120
Query: 186 aaagcataatcctaatgatcgacgtatcattctctctgcatggaatccagttgatcttaa 245
||||||||||||| |||||||||| ||||||||| | || ||||||||| |||||||||
Sbjct: 121 aaagcataatcctgatgatcgacggatcattctcacagcttggaatccatctgatcttaa 180
Query: 246 attgatggcacttccaccctgccacatgtttgcacagttctttgtagcaaatggagaatt 305
|||||||||||||| || |||||||||||||| ||||||| |||||||||||| || ||
Sbjct: 181 gttgatggcacttcctccttgccacatgtttgcgcagttctatgtagcaaatggggagtt 240
Query: 306 atcatgtcaaatgtatcagcgatctgctgacatgggcctgggcgtgccatttaatattgc 365
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 241 gtcatgtcaaatgtatcagcgatctgcggatatgggcctgggcgtgccatttaatattgc 300
Query: 366 atcttatgcgctcctgacatgcatgattgctcatgtttgtgaactcgttccaggtgattt 425
||||||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 301 atcttatgcgctcttgacatgcatgattgctcatgtttgtgacctagttccgggtgattt 360
Query: 426 cgtccatgttattggggatgcacatgtttaccacaatcatgtgcggcctttgcaggagca 485
|||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||
Sbjct: 361 tatccatgttattggggatgcacatgtttaccgcaatcatgtgaagcctttgcaggaaca 420
Query: 486 gcttcttaacctacctaaaccttttcctactttgaagataaattcagagaagaaagatat 545
||| | ||||| || ||||||||| | ||||||||||||| || |||||||||||||
Sbjct: 421 gctccagaacctgccaggaccttttccgattttgaagataaatccaaagaagaaagatat 480
Query: 546 agactcttttgtagctgctgatttcaagcttgtaggctataatcctcaccagaagattga 605
||| ||||||| ||| ||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 481 agattcttttgaggctactgatttcaagctcataggctatgatcctcaccagaagatcca 540
Query: 606 gatgaagatggcagttta 623
||||||||||| |||||
Sbjct: 541 aatgaagatggctgttta 558
>gnl|LJGI|TC63097 similar to UniRef100_Q05763 Cluster: Bifunctional dihydrofolate
reductase-thymidylate synthase 2 (DHFR-TS 2) [Includes:
Dihydrofolate reductase ; Thymidylate synthase ]; n=1;
Arabidopsis thaliana|Rep: Bifunctional dihydrofolate
reductase-thymidylate synthase 2 (DHFR-TS 2) [Includes:
Dihydrofolate reductase ; Thymidylate synthase ] -
Arabidopsis thaliana (Mouse-ear cress), partial (28%)
Length = 804
Score = 571 bits (288), Expect = e-162
Identities = 435/484 (89%)
Strand = Plus / Plus
Query: 140 actccggccaaggatatgatcagcttttagatgttattaacaagataaagcataatccta 199
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 actccggcaaaggatttgatcagcttttagatgttattaacaagataaagcataatcctg 61
Query: 200 atgatcgacgtatcattctctctgcatggaatccagttgatcttaaattgatggcacttc 259
|||||||||| ||||||||||| || ||||||||| ||||||||| |||||||||||||
Sbjct: 62 atgatcgacggatcattctctcagcttggaatccatctgatcttaagttgatggcacttc 121
Query: 260 caccctgccacatgtttgcacagttctttgtagcaaatggagaattatcatgtcaaatgt 319
| || |||||||||||||| ||||||| |||||||||||| || || |||||||||||||
Sbjct: 122 ctccttgccacatgtttgcgcagttctatgtagcaaatggggagttgtcatgtcaaatgt 181
Query: 320 atcagcgatctgctgacatgggcctgggcgtgccatttaatattgcatcttatgcgctcc 379
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atcagcgatctgcggatatgggcctgggcgtgccatttaatattgcatcttatgcgctct 241
Query: 380 tgacatgcatgattgctcatgtttgtgaactcgttccaggtgatttcgtccatgttattg 439
|||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||
Sbjct: 242 tgacatgcatgattgctcatgtttgtgacctagttccgggtgattttatccatgttattg 301
Query: 440 gggatgcacatgtttaccacaatcatgtgcggcctttgcaggagcagcttcttaacctac 499
|||||||||||||||||| |||||||||| |||||||||||| ||||| | ||||| |
Sbjct: 302 gggatgcacatgtttaccgcaatcatgtgaagcctttgcaggaacagctccagaacctgc 361
Query: 500 ctaaaccttttcctactttgaagataaattcagagaagaaagatatagactcttttgtag 559
| | ||||||||| | ||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 362 caagaccttttccgattttgaagataaatccaaagaagaaagatatagattcttttgagg 421
Query: 560 ctgctgatttcaagcttgtaggctataatcctcaccagaagattgagatgaagatggcag 619
|| ||||||||||||| |||||||| |||||||||||||||| | ||||||||||| |
Sbjct: 422 ctactgatttcaagctcataggctatgatcctcaccagaagatccaaatgaagatggctg 481
Query: 620 ttta 623
||||
Sbjct: 482 ttta 485