Miyakogusa Predicted Gene

Lj0g3v0331039.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0331039.1 tr|G7ZVP9|G7ZVP9_MEDTR Leucine-rich repeat
receptor-like protein kinase (Fragment) OS=Medicago
trunc,60.87,5e-18,LRRNT_2,Leucine-rich repeat-containing N-terminal,
type 2,CUFF.22553.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338700 weakly similar to UniRef100_A7Q537 Cluster: Ch...   198   1e-50
gnl|LJGI|TC76205 weakly similar to UniRef100_A7QGE7 Cluster: Chr...   121   2e-27

>gnl|LJGI|FS338700 weakly similar to UniRef100_A7Q537 Cluster: Chromosome undetermined
           scaffold_51, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (9%)
          Length = 671

 Score =  198 bits (100), Expect = 1e-50
 Identities = 178/204 (87%)
 Strand = Plus / Plus

                                                                       
Query: 38  ccattctatgcatctctttctttgttgaaagttctgataccaagaagtgcatggagacag 97
           ||||||||||||| | ||||| ||||| ||||||  |||| |||||||||| |||| |||
Sbjct: 121 ccattctatgcatttgtttctctgttggaagttcccatacaaagaagtgcaaggaggcag 180

                                                                       
Query: 98  agaggcaagctcttctcaggttaaaaggtggtttctctaagggaagggaagttctttcct 157
           |||||||| ||||||||| ||| ||||||||||||  ||| |||||| || |||||||||
Sbjct: 181 agaggcaatctcttctcaagttgaaaggtggtttcgttaatggaaggaaacttctttcct 240

                                                                       
Query: 158 catggataggtgaagatttctgcaagtgggaaggaatttcatgtgacaatttaacttgtc 217
           |||||| |||||||||||  ||||||||| |||||||||||||||||||||||||| | |
Sbjct: 241 catggaaaggtgaagattgttgcaagtggaaaggaatttcatgtgacaatttaactggcc 300

                                   
Query: 218 atgtaaccggtttggctattgaag 241
           |||||||| |||||| | ||||||
Sbjct: 301 atgtaaccagtttggatcttgaag 324



 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 248 tgcaaggtaagttagattcttcaatat 274
           |||||||||||||||||||||||||||
Sbjct: 352 tgcaaggtaagttagattcttcaatat 378


>gnl|LJGI|TC76205 weakly similar to UniRef100_A7QGE7 Cluster: Chromosome undetermined
           scaffold_91, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_91, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (17%)
          Length = 969

 Score =  121 bits (61), Expect = 2e-27
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                       
Query: 125 gtggtttctctaagggaagggaagttctttcctcatggataggtgaagatttctgcaagt 184
           ||||||||  ||| |||||| || ||||||||||||||| |||||||||||  |||||||
Sbjct: 1   gtggtttcgttaatggaaggaaacttctttcctcatggaaaggtgaagattgttgcaagt 60

                                                                    
Query: 185 gggaaggaatttcatgtgacaatttaacttgtcatgtaaccggtttggctattgaag 241
           || |||||||||||||||||||||||||| | ||||||||| |||||| | ||||||
Sbjct: 61  ggaaaggaatttcatgtgacaatttaactggccatgtaaccagtttggatcttgaag 117