Miyakogusa Predicted Gene

Lj0g3v0330529.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0330529.1 CUFF.22510.1
         (309 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO011418 similar to UniRef100_Q1QNB2 Cluster: Glycogen ...   196   6e-50
gnl|LJGI|TC72565 similar to UniRef100_Q8RW43 Cluster: TCP1 prote...    64   5e-10

>gnl|LJGI|GO011418 similar to UniRef100_Q1QNB2 Cluster: Glycogen debranching enzyme
           GlgX; n=1; Nitrobacter hamburgensis X14|Rep: Glycogen,
           partial (2%)
          Length = 637

 Score =  196 bits (99), Expect = 6e-50
 Identities = 99/99 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaaaagggcagaggatggaatgcagagcaacagcgtatccgacaagtcgtgcgctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atgaaaaaagggcagaggatggaatgcagagcaacagcgtatccgacaagtcgtgcgctg 598

                                                  
Query: 61  cctcctctgactattaccattgatggaaacgcatcggat 99
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cctcctctgactattaccattgatggaaacgcatcggat 637


>gnl|LJGI|TC72565 similar to UniRef100_Q8RW43 Cluster: TCP1 protein; n=1; Lupinus
           albus|Rep: TCP1 protein - Lupinus albus (White lupin),
           partial (7%)
          Length = 795

 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 39  gtatccgacaagtcgtgcgctgcctcctctgactattaccattgatggaaacgcatcgga 98
           |||||||||||||||| |  | |||||||||| | |  |||||||||| |||| ||  ||
Sbjct: 666 gtatccgacaagtcgtccttttcctcctctgattctcgccattgatgggaacgtatgaga 725

                               
Query: 99  tccaaactttacttctccag 118
           ||||||||||||||||||||
Sbjct: 726 tccaaactttacttctccag 745