Miyakogusa Predicted Gene
- Lj0g3v0329999.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0329999.2 Non Chatacterized Hit- tr|I4D7T0|I4D7T0_9FIRM
Putative membrane protein OS=Desulfosporosinus
acidiph,32.57,2e-18,Rhomboid-like,NULL; Rhomboid,Peptidase S54,
rhomboid domain; no description,NULL; SUBFAMILY NOT NAME,CUFF.22469.2
(1662 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75129 similar to UniRef100_A7PAN1 Cluster: Chromosome... 1338 0.0
gnl|LJGI|GO005095 similar to UniRef100_A6YA90 Cluster: NADH-plas... 1300 0.0
>gnl|LJGI|TC75129 similar to UniRef100_A7PAN1 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 980
Score = 1338 bits (675), Expect = 0.0
Identities = 685/687 (99%), Gaps = 1/687 (0%)
Strand = Plus / Plus
Query: 976 tttgaaatagcaagtcctgttaggaatgctgatctcgagctgttttcgcttcctctacta 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 tttgaaatagcaagtcctgttaggaatgctgatctcgagctgttttcgcttcctctacta 77
Query: 1036 tatggagcaaagataaatcatttgatcatggtcggagaatggtggaggcttgtaacacca 1095
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tatg-agcaaagataaatcatttgatcatggtcggagaatggtggaggcttgtaacacca 136
Query: 1096 atgtttctgcatgcgggaatctttcacttggctctcagttgttgggctcttctatcattc 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgtttctgcatgcgggaatctttcacttggctctcagttgttgggctcttctatcattc 196
Query: 1156 gggcctcaagtttgcaaaggctatggttcatttacatttttcatgatctacatactgggt 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gggcctcaagtttgcaaaggctatggttcatttacatttttcatgatctacatactgggt 256
Query: 1216 ggagtttctggaaacttgacaagttttatgcatacaccagatccagctgttggtgggact 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggagtttctggaaacttgacaagttttatgcatacaccagatccagctgttggtgggact 316
Query: 1276 ggacctgtatttgcagtaattggtgcttggctcatgtatcaaattcaaaatagagatgtt 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggacctgtatttgcagtaattggtgcttggctcatgtatcaaattcaaaatagagatgtt 376
Query: 1336 attgcaaatgatgcttcagagaacctgttccagaaggcaataataattacagcacttggc 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 attgcaaatgatgcttcagagaacctgttccagaaggcaataataattacagcacttggc 436
Query: 1396 ttcatcttaagtagccttggtcctattgatgagtggtcacactttggagcagctttcaca 1455
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttcatcttaagtagccctggtcctattgatgagtggtcacactttggagcagctttcaca 496
Query: 1456 ggcatggcatatgggtttctaaccagcccagctcttcagttggatgatacgtcaggaact 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggcatggcatatgggtttctaaccagcccagctcttcagttggatgatacgtcaggaact 556
Query: 1516 ggtcgagaagaagggctcaaacttgttagaagaaatggtgattcttggaaatcgctgatc 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggtcgagaagaagggctcaaacttgttagaagaaatggtgattcttggaaatcgctgatc 616
Query: 1576 atattcaccatcttcattgctgttttaagctctctccctttctttatggagccccctctc 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atattcaccatcttcattgctgttttaagctctctccctttctttatggagccccctctc 676
Query: 1636 agtgctgacaccttagaatttatgtag 1662
|||||||||||||||||||||||||||
Sbjct: 677 agtgctgacaccttagaatttatgtag 703
>gnl|LJGI|GO005095 similar to UniRef100_A6YA90 Cluster: NADH-plastoquinone
oxidoreductase subunit 5; n=1; Kalanchoe
daigremontiana|Rep:, partial (2%)
Length = 706
Score = 1300 bits (656), Expect = 0.0
Identities = 693/705 (98%), Gaps = 2/705 (0%)
Strand = Plus / Plus
Query: 160 ggtattctgaagataaacaacacttgcaccctagagccaaggaaggtttacactttggtt 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggtattctgaagataaacaacacttgcaccctagagccaaggaaggtttacactttggtt 62
Query: 220 tggtgttttaaagaggtgttcatggctgcatttccgatatgttacaaaacgcgctacagg 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tggtgttttaaagaggtgttcatggctgcatttccgatatgttacaaaacgcgctacagg 122
Query: 280 gaccaaaatctatcaacccaaagcgtaattagacagagtgacaagagatttatgcttgac 339
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gactaaaatctatcaacccaaagcgtaattagacagagtgacaagagatttatgcttgac 182
Query: 340 tcggataatatgctaaggtccttcccttcaaatatccttacaaaatcaaacacacaagaa 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcggataatatgctaaggtccttcccttcaaatatccttacaaaatcaaacacacaagaa 242
Query: 400 aggaatgcacctaggtgcatagttcttggcagagattctttgcataagaccacgacaaaa 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aggaatgcacctaggtgcatagttcttggcagagattctttgcataagaccacgacaaaa 302
Query: 460 gctcgtagtcaagacagtaacttaagcttctttcagggatgccattcaaagnnnnnnnga 519
||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 303 gctcgtagtcaagacagtaacttaagcttctttcagggatgccattcaaagaaaaaaaaa 362
Query: 520 ctttccacagtttggtgttcaggagagtctagctctattgagaagcaactaagatcatta 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctttccacagtttggtgttcaggagagtctagctctattgagaagcaactaagatcatta 422
Query: 580 gattgctattttggaaagcttcaagataatgcaaagttaagaacttttgatacatcaaac 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gattgctattttggaaagcttcaagataatgcaaagttaagaacttttgatacatcaaac 482
Query: 640 aaggtgatgcagctggcgcttcacagattcaaatcaagaaatgaactggagtctcttgat 699
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 483 aaggtgatgcagctggcgcttcacagattcagatcaagaaatgaactggagtctcttgat 542
Query: 700 gagtatcttggaaaactaaataatgcaggaataaatcaagagtctcttgtgccattttat 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gagtatcttggaaaactaaataatgcaggaataaatcaagagtctcttgtgccattttat 602
Query: 760 gttgagaatcgctgtgaagaaaatttagcaccaaaacaatcactcagaaattatactgga 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gttgagaatcgctgtgaagaaaatttagcaccaaaacaatcactcagaaattatactgga 662
Query: 820 agaacaaactttaggaaacgcaatacttatgtggatctaagaaga 864
|| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 663 ag-acaaacttta-gaaacgcaatacttatgtggatctaagaaga 705