Miyakogusa Predicted Gene

Lj0g3v0329949.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0329949.2 tr|C6CY24|C6CY24_PAESJ Histidine kinase
(Precursor) OS=Paenibacillus sp. (strain JDR-2)
GN=Pjdr2_206,36.36,2.1, ,CUFF.22480.2
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74792 similar to UniRef100_Q2HV31 Cluster: Prefoldin;...   206   6e-53
gnl|LJGI|TC81345                                                       52   2e-06

>gnl|LJGI|TC74792 similar to UniRef100_Q2HV31 Cluster: Prefoldin; n=1; Medicago
           truncatula|Rep: Prefoldin - Medicago truncatula (Barrel
           medic), partial (8%)
          Length = 614

 Score =  206 bits (104), Expect = 6e-53
 Identities = 116/120 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaatttccaggtctttgactcatcaaactccaacaattgcgcaagtaaaagcgaaaaa 60
           |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 425 atgaatttgcaggtctttgactcatcaaactccaacaattgcacaagtaaaagcgaaaaa 366

                                                                       
Query: 61  agttgtgagaaattagcttttcagaatctgccatttctgcatgcattcctcaaagccaag 120
           ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 365 agttgtgagaaattagcttttcagaatctgctatctctgcatgcattcctcaaagccaag 306


>gnl|LJGI|TC81345 
          Length = 471

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 83  agaatctgccatttctgcatgcattcctcaaagccaag 120
           ||||||||| || ||||||||||||||||||| |||||
Sbjct: 217 agaatctgctatctctgcatgcattcctcaaaaccaag 180