Miyakogusa Predicted Gene
- Lj0g3v0329679.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0329679.2 tr|B9H9B5|B9H9B5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_802398 PE=4
SV=1,62.6,0,ATP-DEPENDENT PROTEASE (CEREBLON),NULL; TauE,Transmembrane
protein TauE like; seg,NULL,CUFF.22501.2
(768 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593975 similar to UniRef100_Q6EQH5 Cluster: Membrane ... 825 0.0
gnl|LJGI|TC63571 similar to UniRef100_A7P5B8 Cluster: Chromosome... 434 e-121
gnl|LJGI|GO011633 similar to UniRef100_Q6EQH5 Cluster: Membrane ... 428 e-119
gnl|LJGI|AV421223 similar to UniRef100_A7P5B8 Cluster: Chromosom... 68 9e-11
gnl|LJGI|AV410269 homologue to UniRef100_A7PPN6 Cluster: Chromos... 58 8e-08
>gnl|LJGI|DC593975 similar to UniRef100_Q6EQH5 Cluster: Membrane protein-like; n=1;
Oryza sativa Japonica Group|Rep: Membrane protein-like -
Oryza sativa subsp. japonica (Rice), partial (32%)
Length = 589
Score = 825 bits (416), Expect = 0.0
Identities = 458/475 (96%), Gaps = 14/475 (2%)
Strand = Plus / Plus
Query: 308 cactttcaaagtgtatgattatgggtgcagcattctcaactgtattcttcaacttgaagt 367
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactttcaaagtgtattattatgggtgcagcattctcaactgtattcttcaacttgaagt 60
Query: 368 taaagcatcccacacttgatataccgattatcgactatgatttggtgctgcttattcaac 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaagcatcccacacttgatataccgattatcgactatgatttggtgctgcttattcaac 120
Query: 428 ccatgctcatgcttggcattagcataggagttgttttaagtgtaatgtttgcaaattgga 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatgctcatgcttggcattagcataggagttgttttaagtgtaatgtttgcaaattgga 180
Query: 488 tggtcactgttctcctgatcatcctctgtctggggacatcaatcaaggcattcttcaagg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtcactgttctcctgatcatcctctgtctggggacatcaatcaaggcattcttcaagg 240
Query: 548 gtgttgagacatggaaaaaggaaaccattataaaagaggagactgtcatgcttttggagt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgttgagacatggaaaaaggaaaccattataaaagaggagactgtcatgcttttggagt 300
Query: 608 ctacagcaccttgcagtggggatgagcaatacaaccttcttcctggtagtccagatggtg 667
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctacagcaccttgcagtggggattagcaatacaaccttcttcctggtagtccagatggtg 360
Query: 668 ggcctcaaaagaag--------------ggtgtccattctgggcaacatttactggaagc 713
|||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 361 ggcctcaaaagaagggtagaaagcatgaggtgtccattctgggcaacatttactggaagc 420
Query: 714 agtttggacttctttcttttgtctggcttgcataccttctcttacagattgctaa 768
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtttggacttccttcttttgtctggcttgcataccttctcttacagattgctaa 475
>gnl|LJGI|TC63571 similar to UniRef100_A7P5B8 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 758
Score = 434 bits (219), Expect = e-121
Identities = 222/223 (99%)
Strand = Plus / Plus
Query: 1 atggtttctttcagttttctgcttgttcctttcttcttttacgccataatgagcactaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atggtttctttcagttttctgcttgttcctttcttcttttacgccataatgagcactaaa 595
Query: 61 attgaagcatccgggataaatggagcacaacctttttcttaccatgacaaagtgatggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 attgaagcatccgggataaatggagcacaacctttttcttaccatgacaaagtgatggag 655
Query: 121 ttcttatggagtcatccaagttatcaacatgtttggccagaaatagaatttggctggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ttcttatggagtcatccaagttatcaacatgtttggccagaaatagaatttggctggcaa 715
Query: 181 atcattgttggcaccttgaatggaatcattggagcagcatttg 223
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 716 atcattgttggcaccttgattggaatcattggagcagcatttg 758
>gnl|LJGI|GO011633 similar to UniRef100_Q6EQH5 Cluster: Membrane protein-like; n=1;
Oryza sativa Japonica Group|Rep: Membrane protein-like -
Oryza sativa subsp. japonica (Rice), partial (30%)
Length = 664
Score = 428 bits (216), Expect = e-119
Identities = 249/263 (94%), Gaps = 14/263 (5%)
Strand = Plus / Plus
Query: 520 gggacatcaatcaaggcattcttcaagggtgttgagacatggaaaaaggaaaccattata 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gggacatcaatcaaggcattcttcaagggtgttgagacatggaaaaaggaaaccattata 328
Query: 580 aaagaggagactgtcatgcttttggagtctacagcaccttgcagtggggatgagcaatac 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaagaggagactgtcatgcttttggagtctacagcaccttgcagtggggatgagcaatac 388
Query: 640 aaccttcttcctggtagtccagatggtgggcctcaaaagaag--------------ggtg 685
|||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 389 aaccttcttcctggtagtccagatggtgggcctcaaaagaagggtagaaagcatgaggtg 448
Query: 686 tccattctgggcaacatttactggaagcagtttggacttctttcttttgtctggcttgca 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tccattctgggcaacatttactggaagcagtttggacttctttcttttgtctggcttgca 508
Query: 746 taccttctcttacagattgctaa 768
|||||||||||||||||||||||
Sbjct: 509 taccttctcttacagattgctaa 531
Score = 367 bits (185), Expect = e-101
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 337 gcattctcaactgtattcttcaacttgaagttaaagcatcccacacttgatataccgatt 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcattctcaactgtattcttcaacttgaagttaaagcatcccacacttgatataccgatt 60
Query: 397 atcgactatgatttggtgctgcttattcaacccatgctcatgcttggcattagcatagga 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcgactatgatttggtgctgcttattcaacccatgctcatgcttggcattagcatagga 120
Query: 457 gttgttttaagtgtaatgtttgcaaattggatggtcactgttctcctgatcatcctctgt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgttttaagtgtaatgtttgcaaattggatggtcactgttctcctgatcatcctctgt 180
Query: 517 ctggg 521
|||||
Sbjct: 181 ctggg 185
>gnl|LJGI|AV421223 similar to UniRef100_A7P5B8 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 414
Score = 67.9 bits (34), Expect = 9e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 535 gcattcttcaagggtgttgagacatggaaaaaggaaaccattataaaagaggag 588
|||||||| || || ||||||||||||||||||||||||||||| ||| |||||
Sbjct: 26 gcattcttgaaaggggttgagacatggaaaaaggaaaccattatgaaaaaggag 79
>gnl|LJGI|AV410269 homologue to UniRef100_A7PPN6 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 400
Score = 58.0 bits (29), Expect = 8e-08
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 220 tttggaagcgttgggggagttggtggtggtggaatctttgtgccaatgctgattttgatc 279
||||||| |||||| || |||||||||||||| || || || || ||||| | | ||||
Sbjct: 259 tttggaaccgttggtggtgttggtggtggtggcattttcgttcctatgcttactctgatt 318
Query: 280 attgggtttgatccaaaatcagcagctgcactttcaaagtgtatgattatggg 332
|||| |||||| | ||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 319 gttggttttgataccaaatctgctgctgctctttccaagtgtatgataatggg 371