Miyakogusa Predicted Gene
- Lj0g3v0329519.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0329519.1 Non Chatacterized Hit- tr|B9SFW2|B9SFW2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,35.45,2e-18,coiled-coil,NULL; seg,NULL,CUFF.23259.1
(1164 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72371 similar to UniRef100_Q9ZU48 Cluster: Expressed ... 749 0.0
gnl|LJGI|BW598297 similar to UniRef100_Q9N2M8 Cluster: Headcase ... 737 0.0
gnl|LJGI|TC67236 similar to UniRef100_Q9ZU48 Cluster: Expressed ... 680 0.0
gnl|LJGI|TC65407 similar to UniRef100_Q0JQT8 Cluster: Os01g01392... 68 1e-10
gnl|LJGI|FS317926 similar to UniRef100_A7PGZ0 Cluster: Chromosom... 58 1e-07
>gnl|LJGI|TC72371 similar to UniRef100_Q9ZU48 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (28%)
Length = 1512
Score = 749 bits (378), Expect = 0.0
Identities = 381/382 (99%)
Strand = Plus / Plus
Query: 1 atgggtgtgccgatcaattctgcggtggtttccggtgattaccagaaccgggtcttctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 atgggtgtgccgatcaattctgcggtggtttccggtgattaccagaaccgggtcttctcc 1190
Query: 61 gatgatgagagatcggatcatggggtgcctgtgggatatagaaaaccacccacaccaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 gatgatgagagatcggatcatggggtgcctgtgggatatagaaaaccacccacaccaaca 1250
Query: 121 ccacagcaacaggcacagcaacaattacatacacagactcagtcacagtcacatcctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 ccacagcaacaggcacagcaacaattacatacacagactcagtcacagtcacatcctgct 1310
Query: 181 caatttcaacagaggtcaagtggcggcactgatttgccttctcccgattcagtttcaagt 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1311 caatttcaacagaggtcaagtggcggcactgatttgccttctcctgattcagtttcaagt 1370
Query: 241 gatagtagtcttgcgaatgcaatgtcgcgtcaaaagcctgtgatctatcaagagcaagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 gatagtagtcttgcgaatgcaatgtcgcgtcaaaagcctgtgatctatcaagagcaagtt 1430
Query: 301 ctgattcaatctggaactacaagggttcctactcatagtaaccctgtggatccaaaactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 ctgattcaatctggaactacaagggttcctactcatagtaaccctgtggatccaaaactt 1490
Query: 361 aatgtgtctgatccacaaagtc 382
||||||||||||||||||||||
Sbjct: 1491 aatgtgtctgatccacaaagtc 1512
>gnl|LJGI|BW598297 similar to UniRef100_Q9N2M8 Cluster: Headcase protein [Contains:
Headcase short protein]; n=1; Drosophila
melanogaster|Rep: Headcase protein [Contains: Headcase
short protein] - Drosophila melanogaster (Fruit fly),
partial (4%)
Length = 467
Score = 737 bits (372), Expect = 0.0
Identities = 372/372 (100%)
Strand = Plus / Plus
Query: 562 tatatacatggcacacaattcattcatcataatcctgcaaatgcaattcctgcatattat 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tatatacatggcacacaattcattcatcataatcctgcaaatgcaattcctgcatattat 155
Query: 622 cctgtatatccttcccagcaacagactcatccccagcatgcccaagtttactatgtacct 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 cctgtatatccttcccagcaacagactcatccccagcatgcccaagtttactatgtacct 215
Query: 682 gcaagacaagcccaagcttacaacttgtctatgcagcaggctaatatgggtgaatctgga 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gcaagacaagcccaagcttacaacttgtctatgcagcaggctaatatgggtgaatctgga 275
Query: 742 aaaccgcaaactcctccaaatcctactacattggttcctcaaactgcagcttacaacaac 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaccgcaaactcctccaaatcctactacattggttcctcaaactgcagcttacaacaac 335
Query: 802 cccatgagaaatgctcctttacctaaaactgaaatgacagcagcaggttacagaactgca 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cccatgagaaatgctcctttacctaaaactgaaatgacagcagcaggttacagaactgca 395
Query: 862 actggaggtagccctcaattagttcaggttcccgcaaatcagcttcagcatcagcagcaa 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 actggaggtagccctcaattagttcaggttcccgcaaatcagcttcagcatcagcagcaa 455
Query: 922 tatgtgacttac 933
||||||||||||
Sbjct: 456 tatgtgacttac 467
>gnl|LJGI|TC67236 similar to UniRef100_Q9ZU48 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 954
Score = 680 bits (343), Expect = 0.0
Identities = 346/347 (99%)
Strand = Plus / Plus
Query: 1 atgggtgtgccgatcaattctgcggtggtttccggtgattaccagaaccgggtcttctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgggtgtgccgatcaattctgcggtggtttccggtgattaccagaaccgggtcttctcc 667
Query: 61 gatgatgagagatcggatcatggggtgcctgtgggatatagaaaaccacccacaccaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gatgatgagagatcggatcatggggtgcctgtgggatatagaaaaccacccacaccaaca 727
Query: 121 ccacagcaacaggcacagcaacaattacatacacagactcagtcacagtcacatcctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ccacagcaacaggcacagcaacaattacatacacagactcagtcacagtcacatcctgct 787
Query: 181 caatttcaacagaggtcaagtggcggcactgatttgccttctcccgattcagtttcaagt 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 788 caatttcaacagaggtcaagtggcggcactgatttgccttctcctgattcagtttcaagt 847
Query: 241 gatagtagtcttgcgaatgcaatgtcgcgtcaaaagcctgtgatctatcaagagcaagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gatagtagtcttgcgaatgcaatgtcgcgtcaaaagcctgtgatctatcaagagcaagtt 907
Query: 301 ctgattcaatctggaactacaagggttcctactcatagtaaccctgt 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 ctgattcaatctggaactacaagggttcctactcatagtaaccctgt 954
>gnl|LJGI|TC65407 similar to UniRef100_Q0JQT8 Cluster: Os01g0139200 protein; n=2; Oryza
sativa Japonica Group|Rep: Os01g0139200 protein - Oryza
sativa subsp. japonica (Rice), partial (21%)
Length = 1185
Score = 67.9 bits (34), Expect = 1e-10
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 277 cctgtgatctatcaagagcaagttctgattcaatctggaactacaagggttcctactc 334
||||||||||||||||| ||||||| ||||||||||||||| || |||||| |||||
Sbjct: 1098 cctgtgatctatcaagaccaagttcatattcaatctggaacttcacgggttcatactc 1155
Score = 56.0 bits (28), Expect = 5e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 56 tctccgatgatgagagatcggatcatggggtgcctgtggg 95
|||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 883 tctccgatgaagagagatcggagcatggggtccctgtggg 922
>gnl|LJGI|FS317926 similar to UniRef100_A7PGZ0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 796
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 213 tttgccttctcccgattcagtttcaagtgatagtagt 249
|||||||||||| ||||||||| ||||||||||||||
Sbjct: 672 tttgccttctccagattcagttgcaagtgatagtagt 708