Miyakogusa Predicted Gene
- Lj0g3v0329479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0329479.1 Non Chatacterized Hit- tr|I1N256|I1N256_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,30.72,1e-18,RNI-like,NULL; FBD,FBD; no description,NULL; FAMILY
NOT NAMED,NULL,CUFF.22436.1
(948 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69553 weakly similar to UniRef100_Q8L7H1 Cluster: F-b... 1790 0.0
gnl|LJGI|FS343807 180 1e-44
gnl|LJGI|DC599791 weakly similar to UniRef100_A7QK65 Cluster: Ch... 109 3e-23
gnl|LJGI|TC73575 similar to UniRef100_A7QK65 Cluster: Chromosome... 107 1e-22
gnl|LJGI|TC68402 weakly similar to UniRef100_Q8LF09 Cluster: F-b... 88 1e-16
gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosom... 78 1e-13
gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyc... 76 4e-13
gnl|LJGI|TC82244 62 7e-09
gnl|LJGI|TC59854 similar to UniRef100_A7QK60 Cluster: Chromosome... 52 6e-06
>gnl|LJGI|TC69553 weakly similar to UniRef100_Q8L7H1 Cluster: F-box/LRR-repeat protein
At4g14103; n=1; Arabidopsis thaliana|Rep:
F-box/LRR-repeat protein At4g14103 - Arabidopsis thaliana
(Mouse-ear cress), partial (13%)
Length = 1557
Score = 1790 bits (903), Expect = 0.0
Identities = 933/948 (98%)
Strand = Plus / Plus
Query: 1 atggttctctcaaagaggtggaaaccactctggctttcagtccctatcctagactttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atggttctctcaaagaggtggaaaccactctggctttcagtccctatcctagactttcac 366
Query: 61 caagatcgatatctccaagggaaggaatcgaaatcgtactctgacttcagcaatttcgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 caagatcgatatctccaagggaaggaatcgaaatcgtactctgacttcagcaatttcgta 426
Query: 121 tccgctactatcctttcacgaggtttgcatcaacccatcaaaaactttaccctcagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tccgctactatcctttcacgaggtttgcatcaacccatcaaaaactttaccctcagaaca 486
Query: 181 ggtgacgattgtccatcttccgatgtcaaggaatggttaaaagcagcnnnnnnntgccaa 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487 ggtgacgattgtccatcttccgatgtcaaggaatggttaaaagcagcaaaaaaatgccaa 546
Query: 241 gttgagaaactcgaaatttggtatcccgattcaccagtgcctcactatattttcagatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gttgagaaactcgaaatttggtatcccgattcaccagtgcctcactatattttcagatgc 606
Query: 301 acaaccctagttgttctcaagctatatgagacatattttgaagctttttcttctgtgcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 acaaccctagttgttctcaagctatatgagacatattttgaagctttttcttctgtgcac 666
Query: 361 ctgcccttgctcaaaacactgtatatgcactatgttcagtttataaaccctcaatttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ctgcccttgctcaaaacactgtatatgcactatgttcagtttataaaccctcaatttttg 726
Query: 421 atgaaccttctttatgggtgtcctgttcttgaagatttggaaatacttcacgtatatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atgaaccttctttatgggtgtcctgttcttgaagatttggaaatacttcacgtatatttt 786
Query: 481 gatgactcagatttgggatcgaatgacacgtcttttaatgactctccctttgaggggcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gatgactcagatttgggatcgaatgacacgtcttttaatgactctccctttgaggggcag 846
Query: 541 gttaaaagtttatccaatttggtcagagctaaggnnnnnnnncaccttgctttccatatt 600
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 847 gttaaaagtttatccaatttggtcagagctaaggttttttttcaccttgctttccatatt 906
Query: 601 cctgtgaaagctttttccaatgcacagtttctgcacttaaacaagtgtgatgcaggcatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 cctgtgaaagctttttccaatgcacagtttctgcacttaaacaagtgtgatgcaggcatt 966
Query: 661 cctgtatttcccaatttaacttatctggagatctccttcaaacgacactctcttaaatgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 cctgtatttcccaatttaacttatctggagatctccttcaaacgacactctcttaaatgg 1026
Query: 721 aatttggtgcttgatatgctcaatcattgtcctaagcttcaaacggttgtctttgacata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 aatttggtgcttgatatgctcaatcattgtcctaagcttcaaacggttgtctttgacata 1086
Query: 781 cgtcttgatgatgatgaggtttggccagacccaggttttattcctaaatgcttttctacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 cgtcttgatgatgatgaggtttggccagacccaggttttattcctaaatgcttttctacg 1146
Query: 841 catcttaggaagtgctttattaaaggttatgcaggagtggattgtcagatgagatttgca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 catcttaggaagtgctttattaaaggttatgcaggagtggattgtcagatgagatttgca 1206
Query: 901 agatatgttttgcaaaacgcaaccttgttacgttccctgatcatttgc 948
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 agatatgttttgcaaaacgcaaccttgttacgttccctgatcatttgc 1254
>gnl|LJGI|FS343807
Length = 619
Score = 180 bits (91), Expect = 1e-44
Identities = 201/237 (84%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 713 ttaaatggaatttggtgcttgatatgctcaatcattgtcctaagcttcaaacggttgtct 772
||||||||| | ||| ||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 104 ttaaatggagtgtggcgcttgatatgctcaatcattgccctaagcttcaaactgttgtct 163
Query: 773 ttgacatacgtcttgatgatga---tgaggtttggccagacccaggttttattcctaaat 829
|||| || | |||||| ||| ||| ||||||||||| ||||||||| ||||| |||
Sbjct: 164 ttgatttaacttttgatggtgaagatgatgtttggccagatccaggttttgttcctgaat 223
Query: 830 gcttttctacgcatcttaggaagtgctttattaaaggttatgcaggagtggattgtcaga 889
|||||||| | ||||||||||||||||| || || || ||||||| ||| ||| |||
Sbjct: 224 gcttttcttcacatcttaggaagtgcttccttgaaatttttgcaggactgggatgtgaga 283
Query: 890 tgagatttgcaagatatgttttgcaaaacgcaaccttgttacgttccctgatcattt 946
||||||||||||||||||| |||||||| |||||||||||||| || ||| |||||
Sbjct: 284 agagatttgcaagatatgttatgcaaaactcaaccttgttacgtaccatgaccattt 340
>gnl|LJGI|DC599791 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (17%)
Length = 553
Score = 109 bits (55), Expect = 3e-23
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 1 atggttctctcaaagaggtggaaaccactctggctttcagtccctatcctagactttcac 60
||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||| |
Sbjct: 237 atggttctctcaaagagatggaaaccactctggccttcagtctctaccctagacttggtc 296
Query: 61 caagatcgatatctccaagggaaggaatcgaaatcgtactctgacttcagcaatttcgta 120
| |||||||||||| | | |||||||| ||| | || ||| ||||| ||| |||||
Sbjct: 297 gacgatcgatatctcgatgccaaggaatccaaaccatattcttccttcatcaaattcgtg 356
Query: 121 tccgctactatcctttcacgaggtttgcatcaacccatcaaaaactttaccctca 175
| |||| | || || |||||||||||| | ||||||||||||||||| |||||||
Sbjct: 357 tacgctgccattctctcacgaggtttgaaccaacccatcaaaaacttcaccctca 411
>gnl|LJGI|TC73575 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 1447
Score = 107 bits (54), Expect = 1e-22
Identities = 157/189 (83%), Gaps = 3/189 (1%)
Strand = Plus / Plus
Query: 733 gatatgctcaatcattgtcctaagcttcaaacggttgtctttgacat-acgtct--tgat 789
||||||||||||||||| ||||||||||| || ||||||||||| | || | | ||||
Sbjct: 922 gatatgctcaatcattgccctaagcttcatactgttgtctttgatttgacttatgttgat 981
Query: 790 gatgatgaggtttggccagacccaggttttattcctaaatgcttttctacgcatcttagg 849
| |||| ||||||||||||||||||||| ||||| |||||||| | | |||||||||
Sbjct: 982 aaatatgatgtttggccagacccaggttttgttcctgaatgctttcgttcacatcttagg 1041
Query: 850 aagtgctttattaaaggttatgcaggagtggattgtcagatgagatttgcaagatatgtt 909
||||||||| ||||||||| | | ||||||| |||| | |||||||||||| ||||||
Sbjct: 1042 aagtgctttcttaaaggttttagatgagtggaatgtccaaggagatttgcaaggtatgtt 1101
Query: 910 ttgcaaaac 918
||| ||||
Sbjct: 1102 atgccaaac 1110
Score = 63.9 bits (32), Expect = 2e-09
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 105 cttcagcaatttcgtatccgctactatcctttcacgaggtttgcatcaacccatcaaaaa 164
||||| ||||||||| | ||||| ||| || |||||| ||| | ||||||||||||||||
Sbjct: 237 cttcatcaatttcgtgtacgctattattctctcacgatgttcgaatcaacccatcaaaaa 296
Query: 165 ctttaccctcag 176
||| ||||||||
Sbjct: 297 cttcaccctcag 308
Score = 63.9 bits (32), Expect = 2e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 426 ccttctttatgggtgtcctgttcttgaagatttggaaata 465
|||| ||||||||||||| |||||||||||||||||||||
Sbjct: 558 ccttgtttatgggtgtccagttcttgaagatttggaaata 597
>gnl|LJGI|TC68402 weakly similar to UniRef100_Q8LF09 Cluster: F-box/FBD/LRR-repeat
protein At4g00160; n=2; Arabidopsis thaliana|Rep:
F-box/FBD/LRR-repeat protein At4g00160 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 773
Score = 87.7 bits (44), Expect = 1e-16
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 406 aaccctcaatttttgatgaaccttctttatgggtgtcctgttcttgaagatttggaaata 465
|||||||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||
Sbjct: 536 aaccctcaatctttgatggaccttctttatgggtgtccagtacttgaagatttggaaata 595
Score = 81.8 bits (41), Expect = 7e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 28 ctctggctttcagtccctatcctagactttcaccaagatcgatatctccaagggaaggaa 87
||||||||||||||||| | |||||| ||| || | || |||||||| |||| ||| ||
Sbjct: 155 ctctggctttcagtcccaaccctagattttgacgactatagatatctcaaaggaaagaaa 214
Query: 88 tcgaaatcgtactctgacttcagcaatttcgtatccgctactatcctttcacgaggtttg 147
| ||||| | | ||| ||||| ||||||||| | ||| | || || ||||||| ||||
Sbjct: 215 ttgaaattgcagtcttccttcatcaatttcgtgtacgcaatcattctctcacgagctttg 274
Query: 148 catcaacccatcaaaaactttaccctcag 176
|||||||||||||||||||| ||||||||
Sbjct: 275 catcaacccatcaaaaacttcaccctcag 303
Score = 52.0 bits (26), Expect = 6e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 597 tattcctgtgaaagctttttccaatgcacagtttctgcacttaaacaagtgtgatgcagg 656
|||||||||| |||||||| |||| ||| |||||||||||||| |||| ||||| |
Sbjct: 700 tattcctgtggaagcttttcgtaatgtgcaggttctgcacttaaaccagtgcgatgcgga 759
Query: 657 cattcctgtatttc 670
||||||||| ||||
Sbjct: 760 cattcctgtgtttc 773
>gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 812
Score = 77.8 bits (39), Expect = 1e-13
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 596 atattcctgtgaaagctttttccaatgcacagtttctgcacttaaacaagtgtgatgcag 655
|||||||||| ||||||||||| |||| |||||||||| |||| || |||| ||||| |
Sbjct: 673 atattcctgtcaaagctttttcaaatgtgcagtttctgctcttagacgagtgcgatgcgg 732
Query: 656 gcattcctgtatttcccaatttaacttatctggag 690
|||||||| ||||||||||||| |||| |||||
Sbjct: 733 atattcctgtgtttcccaatttaatttatttggag 767
Score = 56.0 bits (28), Expect = 4e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 136 tcacgaggtttgcatcaacccatcaaaaactt 167
||||||| ||||||||||||||||||||||||
Sbjct: 240 tcacgagatttgcatcaacccatcaaaaactt 271
>gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyclin-like F-box; FBD;
Zinc finger, FYVE/PHD-type; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; FBD; Zinc finger,
FYVE/PHD-type - Medicago truncatula (Barrel medic),
partial (19%)
Length = 1534
Score = 75.8 bits (38), Expect = 4e-13
Identities = 134/166 (80%)
Strand = Plus / Plus
Query: 4 gttctctcaaagaggtggaaaccactctggctttcagtccctatcctagactttcaccaa 63
|||||||| ||||| |||| ||||||||||| ||||||| ||| ||||||||| |
Sbjct: 354 gttctctccaagagatggagaccactctggccttcagtctctaccctagacttggtggac 413
Query: 64 gatcgatatctccaagggaaggaatcgaaatcgtactctgacttcagcaatttcgtatcc 123
||||| ||| ||| || ||| ||||||||||||||||| ||||| ||| || || |
Sbjct: 414 gatcggtataaccatggcaagaaatcgaaatcgtactctttcttcaacaaatttgtgtat 473
Query: 124 gctactatcctttcacgaggtttgcatcaacccatcaaaaacttta 169
||| | || || |||||||||| | |||||||||||||||||||||
Sbjct: 474 gctgccattctctcacgaggttggaatcaacccatcaaaaacttta 519
Score = 65.9 bits (33), Expect = 4e-10
Identities = 155/195 (79%), Gaps = 3/195 (1%)
Strand = Plus / Plus
Query: 729 gcttgatatgctcaatcattgtcctaagcttcaaacggttgtctttgacatacgtcttga 788
|||||||||||||||||| || ||||||||||| || |||||||||| || |||
Sbjct: 1055 gcttgatatgctcaatcactgccctaagcttcagacttttgtctttga---actaactga 1111
Query: 789 tgatgatgaggtttggccagacccaggttttattcctaaatgcttttctacgcatcttag 848
|||||| | |||||| | ||||| ||| ||||||||||||||||| | ||||||||
Sbjct: 1112 tgatgacaacttttggctatacccacctttggttcctaaatgcttttcttcacatcttag 1171
Query: 849 gaagtgctttattaaaggttatgcaggagtggattgtcagatgagatttgcaagatatgt 908
||| ||| || ||| | | | ||||| ||| ||| |||||||||||||||| |||||
Sbjct: 1172 gaaatgccttcttacaaaatttacaggattgggatgtgagatgagatttgcaaggtatgt 1231
Query: 909 tttgcaaaacgcaac 923
| |||||||| ||||
Sbjct: 1232 tatgcaaaactcaac 1246
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 410 ctcaatttttgatgaaccttctttatgggtgtcctgttcttgaagatttg 459
|||||| |||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 763 ctcaatgtttgattgaccttctttatgggtgtccaattcttgaagatttg 812
>gnl|LJGI|TC82244
Length = 527
Score = 61.9 bits (31), Expect = 7e-09
Identities = 159/201 (79%), Gaps = 3/201 (1%)
Strand = Plus / Plus
Query: 723 tttggtgcttgatatgctcaatcattgtcctaagcttcaaacggttgtctttgacatacg 782
||||| ||||||||||||||||| ||| ||||||||||||| ||||| ||| || |
Sbjct: 20 tttggcgcttgatatgctcaatcgttgctctaagcttcaaactgttgtttttaac---ct 76
Query: 783 tcttgatgatgatgaggtttggccagacccaggttttattcctaaatgcttttctacgca 842
| || | |||||| ||||||||| ||||| ||| | ||||| |||||||||| | ||
Sbjct: 77 tgatggtcgtgatgatgtttggccatacccatgttctgttcctgaatgcttttcatcaca 136
Query: 843 tcttaggaagtgctttattaaaggttatgcaggagtggattgtcagatgagatttgcaag 902
||| | |||||| || || || || || | |||||| ||||| ||||||||||||||
Sbjct: 137 tctcacaaagtgcattcttgaaaattttgatgcagtggaatgtcatatgagatttgcaag 196
Query: 903 atatgttttgcaaaacgcaac 923
|||||| |||||||| ||||
Sbjct: 197 gtatgttatgcaaaactcaac 217
>gnl|LJGI|TC59854 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 848
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 427 cttctttatgggtgtcctgttcttga 452
||||||||||||||||||||||||||
Sbjct: 698 cttctttatgggtgtcctgttcttga 723