Miyakogusa Predicted Gene

Lj0g3v0329239.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0329239.1 tr|G7KGM9|G7KGM9_MEDTR Myb-like protein AA
OS=Medicago truncatula GN=MTR_5g041570 PE=4 SV=1,60.25,0,HTH_MYB,Myb
domain; seg,NULL; Homeodomain-like,Homeodomain-like;
Myb_DNA-bind_6,NULL; SANT  SWI3, AD,gene.g25708.t1.1
         (1041 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63421 similar to UniRef100_A7NSM1 Cluster: Chromosome...   125   6e-28

>gnl|LJGI|TC63421 similar to UniRef100_A7NSM1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (48%)
          Length = 1244

 Score =  125 bits (63), Expect = 6e-28
 Identities = 188/227 (82%), Gaps = 2/227 (0%)
 Strand = Plus / Plus

                                                                       
Query: 416 aaggaagatcagggaagagttgtaggctgagatggttcaaccagcttgatccaaggatta 475
           ||||||||||||| || ||||| ||  |||| ||||||||||||||||||||||| ||||
Sbjct: 204 aaggaagatcaggaaaaagttgcagattgaggtggttcaaccagcttgatccaagaatta 263

                                                                       
Query: 476 acaggagggctttcagtgaagaagaggaagaaaggctaat-gcaggcacatagaatttat 534
           |||| ||| | ||||  ||||| || ||||| |||||| | |||| | || ||| || ||
Sbjct: 264 acagaaggccattcacagaagaggaagaagagaggctacttgcag-ctcacagagttcat 322

                                                                       
Query: 535 ggcaacaaatgggccatgattgctaggctttttcctggaagaacagataatgctgtgaag 594
           || ||||| |||||| | || || ||||| || || || ||||| |||||||||||||||
Sbjct: 323 gggaacaagtgggccctcatagcaaggctcttcccaggtagaactgataatgctgtgaag 382

                                                          
Query: 595 aatcactggcatgttatcatggctaggaaatatagggaacaatccaa 641
           |||||||||||||| |||||||| |||||  | |||||||| |||||
Sbjct: 383 aatcactggcatgtcatcatggcaaggaagcagagggaacagtccaa 429