Miyakogusa Predicted Gene
- Lj0g3v0329079.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0329079.1 tr|G7ID02|G7ID02_MEDTR Nodulin-like protein
OS=Medicago truncatula GN=MTR_1g099010 PE=4 SV=1,81.25,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; VIT1,Domain of unknown function
DUF125, transmembra,CUFF.22406.1
(672 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64607 similar to UniRef100_A7QN06 Cluster: Chromosome... 157 1e-37
gnl|LJGI|TC81163 similar to UniRef100_A7QN06 Cluster: Chromosome... 58 7e-08
>gnl|LJGI|TC64607 similar to UniRef100_A7QN06 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (87%)
Length = 1126
Score = 157 bits (79), Expect = 1e-37
Identities = 223/271 (82%)
Strand = Plus / Plus
Query: 394 ttgccaaaccctttgcaagctgcagcagcttcagctttggcctttagtgttggtgcaata 453
|||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 485 ttgccaaaccctttgcaagcagcagcagcttcagctttagccttttcagttggtgcaatg 544
Query: 454 gtgccattgcttgcagcctcttttataaagggatataaggtgagggttgcagtggttttg 513
|| || | |||||||| |||||||| |||| |||||||| ||| | | |||||||||
Sbjct: 545 gttcctcttcttgcagcttcttttatcaaggactataaggtaaggctaggagtggttttt 604
Query: 514 gctgcagtgagttttgctttggtggtgtttggttggttaggggcagttttgggtaaggct 573
| || || |||||||||||||||| ||| ||||| | || ||| | |||||||||||
Sbjct: 605 gtggcggttagttttgctttggtggcgttcggttgtatgggagcattcttgggtaaggcg 664
Query: 574 ccagtgttgaggtctgttttgagggtcttaattggaggttggttggctatgtgcattact 633
|| | ||||||||| | |||| ||||| |||| |||||||| || ||| ||| |||
Sbjct: 665 ccggcattgaggtcttgtgtgagagtcttggttgggggttggttagccatggccataact 724
Query: 634 tttgggctaaccaagttgattgggtcaagtg 664
|| ||||||||||||||||||||||||||||
Sbjct: 725 ttcgggctaaccaagttgattgggtcaagtg 755
Score = 137 bits (69), Expect = 1e-31
Identities = 201/245 (82%)
Strand = Plus / Plus
Query: 80 ctctagaaatcgaaaccgaggactttgactactcaaagagatctcagtggcttcgcgcag 139
||||||| || ||||| || |||||||| |||||||| |||| || ||||| || || |
Sbjct: 162 ctctagagattgaaactgatgactttgattactcaaaacgatcccaatggctacgtgctg 221
Query: 140 ctgtcttgggagccaacgacgggctggtctcaacagcatccctgatgatgggcgtgggag 199
| || || |||||||| || || | ||||| |||||| | |||||||||| || ||||
Sbjct: 222 ccgttttaggagccaatgatggtttagtctccacagcagctttgatgatgggtgtaggag 281
Query: 200 cggtcaagcaagacatcaaggcaatgatcttatccggtttcgccgggctggtggccggcg 259
|||| ||||||||| |||||| |||||| | || || || || ||||| ||||| || |
Sbjct: 282 cggtgaagcaagacctcaaggtcatgatcctctcaggatttgcagggcttgtggcaggtg 341
Query: 260 cttgcagcatggccataggggagtttgtgtctgtgtactcccagttggagatagaagttg 319
||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||
Sbjct: 342 cttgcagcatggccataggagagtttgtgtctgtgtactctcaattggacatagaggttg 401
Query: 320 ctcaa 324
|||||
Sbjct: 402 ctcaa 406
>gnl|LJGI|TC81163 similar to UniRef100_A7QN06 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (78%)
Length = 941
Score = 58.0 bits (29), Expect = 7e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 256 ggcgcttgcagcatggccataggggagtttgtgtctgtgtactcccagt 304
||||| |||||||||||||| || |||||||| ||||| ||||||||||
Sbjct: 333 ggcgcgtgcagcatggccattggagagtttgtttctgtttactcccagt 381