Miyakogusa Predicted Gene
- Lj0g3v0328649.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0328649.1 Non Chatacterized Hit- tr|C6TJB7|C6TJB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56814
PE,94.39,0,RAB,NULL; RASTRNSFRMNG,Small GTPase superfamily; small_GTP:
small GTP-binding protein domain,Small G,CUFF.22375.1
(648 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58877 homologue to UniRef100_A7NSN5 Cluster: Chromoso... 1285 0.0
gnl|LJGI|TC57210 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus jap... 256 1e-67
gnl|LJGI|TC70916 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus jap... 210 8e-54
gnl|LJGI|TC67644 UniRef100_Q40206 Cluster: RAB1X; n=1; Lotus jap... 74 1e-12
gnl|LJGI|TC67279 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus jap... 52 4e-06
gnl|LJGI|TC57519 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus jap... 52 4e-06
>gnl|LJGI|TC58877 homologue to UniRef100_A7NSN5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 885
Score = 1285 bits (648), Expect = 0.0
Identities = 648/648 (100%)
Strand = Plus / Plus
Query: 1 atggacgctgcttcgtcttcttcgaatcatgctgaattcgattacttgttcaagcttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggacgctgcttcgtcttcttcgaatcatgctgaattcgattacttgttcaagcttctc 187
Query: 61 atgattggggattcaggggttggcaaaagcacgctgcttctcagcttcacctctgatacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atgattggggattcaggggttggcaaaagcacgctgcttctcagcttcacctctgatacg 247
Query: 121 tttgaggatctttctcccactatcggtgtggatttcaaagttaaatacgttacaattggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttgaggatctttctcccactatcggtgtggatttcaaagttaaatacgttacaattggt 307
Query: 181 gggaaaaagttaaaacttgctatttgggacacagctggacaggaaaggtttagaacactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gggaaaaagttaaaacttgctatttgggacacagctggacaggaaaggtttagaacactt 367
Query: 241 actagttcatattatagaggagcacaaggaataattatggtatatgatgtaactcgacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 actagttcatattatagaggagcacaaggaataattatggtatatgatgtaactcgacgg 427
Query: 301 gagacctttacaaatctatctgatatatgggccaaagaaattgatctatactctacaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gagacctttacaaatctatctgatatatgggccaaagaaattgatctatactctacaaat 487
Query: 361 caagactgtatcaagatgcttgtaggaaacaaagttgataaggaaagtgaaagggttgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 caagactgtatcaagatgcttgtaggaaacaaagttgataaggaaagtgaaagggttgtc 547
Query: 421 agcaaaaaggaagggattgactttgctagggaatatggatgtctttatactgaatgtagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 agcaaaaaggaagggattgactttgctagggaatatggatgtctttatactgaatgtagt 607
Query: 481 gcaaaaacccgagtaaatgttgtgcagtgttttgaagagcttgtaatgaagattttggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gcaaaaacccgagtaaatgttgtgcagtgttttgaagagcttgtaatgaagattttggag 667
Query: 541 acaccaagcctcttggctgatggctcatctggtatgaaaaagaacatcttcaagcagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acaccaagcctcttggctgatggctcatctggtatgaaaaagaacatcttcaagcagaaa 727
Query: 601 cccccacagtctgatgcatcaaatagtagctgttgttcatggtgattg 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cccccacagtctgatgcatcaaatagtagctgttgttcatggtgattg 775
>gnl|LJGI|TC57210 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus japonicus|Rep: RAB1Y -
Lotus japonicus, complete
Length = 985
Score = 256 bits (129), Expect = 1e-67
Identities = 432/533 (81%)
Strand = Plus / Plus
Query: 34 gaattcgattacttgttcaagcttctcatgattggggattcaggggttggcaaaagcacg 93
||||||||||| ||||||||| | | |||||||| ||||| |||||||| |||||||
Sbjct: 76 gaattcgattatttgttcaagttattgatgattggtgattctggggttgggaaaagcagt 135
Query: 94 ctgcttctcagcttcacctctgatacgtttgaggatctttctcccactatcggtgtggat 153
|| |||||| |||||||| ||| ||| ||||| | || ||||| || ||||| |||
Sbjct: 136 cttcttctctctttcacctccgatgaatttcaggatatgtcccccacaattggtgttgat 195
Query: 154 ttcaaagttaaatacgttacaattggtgggaaaaagttaaaacttgctatttgggacaca 213
|| || || ||||| || | || || || |||||| | || || || |||||||| ||
Sbjct: 196 tttaaggtcaaatatgtcgccatagggggtaaaaagctgaagctcgccatttgggatact 255
Query: 214 gctggacaggaaaggtttagaacacttactagttcatattatagaggagcacaaggaata 273
||||| || || || |||||||||||||| || || || |||||||| |||||||||||
Sbjct: 256 gctggccaagagagatttagaacacttacaagctcttactatagaggggcacaaggaatc 315
Query: 274 attatggtatatgatgtaactcgacgggagacctttacaaatctatctgatatatgggcc 333
|| ||||| ||||||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 316 atcatggtttatgatgtaacccgacgagatacatttacaaatctttctgaaatatgggca 375
Query: 334 aaagaaattgatctatactctacaaatcaagactgtatcaagatgcttgtaggaaacaaa 393
|| ||||| ||||| || || |||||||||||||| |||||||||||||| |||||||||
Sbjct: 376 aaggaaatagatctttattcaacaaatcaagactgcatcaagatgcttgttggaaacaaa 435
Query: 394 gttgataaggaaagtgaaagggttgtcagcaaaaaggaagggattgactttgctagggaa 453
|| || ||||| ||||| |||||||| || || || || || || |||||||| ||||||
Sbjct: 436 gtagacaaggagagtgatagggttgtgagtaagaaagagggaatagactttgccagggaa 495
Query: 454 tatggatgtctttatactgaatgtagtgcaaaaacccgagtaaatgttgtgcagtgtttt 513
||||| ||||| | || ||||| ||||| ||||| ||||| || || |||||| |||
Sbjct: 496 tatggttgtctatttatcgaatgcagtgctaaaactcgagttaacgtacagcagtgcttt 555
Query: 514 gaagagcttgtaatgaagattttggagacaccaagcctcttggctgatggctc 566
||||| ||||| ||||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 556 gaagaacttgttttgaagattttggatacacccagcctcttagctgaaggctc 608
>gnl|LJGI|TC70916 UniRef100_Q40207 Cluster: RAB1Y; n=1; Lotus japonicus|Rep: RAB1Y -
Lotus japonicus, partial (98%)
Length = 791
Score = 210 bits (106), Expect = 8e-54
Identities = 435/538 (80%), Gaps = 5/538 (0%)
Strand = Plus / Plus
Query: 34 gaattcgattacttgttcaagcttctcatgattggggattcaggggttggcaaaagcacg 93
||||||||||| ||||||||| | | |||||||| ||||| |||||||| |||||||
Sbjct: 137 gaattcgattatttgttcaagttattgatgattggtgattctggggttgggaaaagcagt 196
Query: 94 ctgcttctcagcttcacctctgatacgtttgaggatctttctcccactatcggtgtggat 153
|| |||||| |||||||| ||| ||| ||||| | || ||||| || ||||| |||
Sbjct: 197 cttcttctctctttcacctccgatgaatttcaggatatgtcccccacaattggtgttgat 256
Query: 154 ttcaaagttaaatacgttacaattggtgggaaaaagttaaaacttgctatttgggacaca 213
|| || || ||||| || | || || || |||||| | || || || |||||||| ||
Sbjct: 257 tttaaggtcaaatatgtcgccatagggggtaaaaagctgaagctcgccatttgggatact 316
Query: 214 gctggacaggaaaggtttagaacacttactagttcatattatagaggagcacaaggaata 273
||||| || || || |||||||||||||| || || || |||||||| |||||||||||
Sbjct: 317 gctggccaagagagatttagaacacttacaagctcttactatagaggggcacaaggaatc 376
Query: 274 attatggtatatgatgtaactcgacgggagacctttacaaatctatctgatatatgggcc 333
|| ||||| ||||||||||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct: 377 atcatggtttatgatgtaacccgacgagatacatttacaaatctttctgaaatatgggca 436
Query: 334 aaagaaattgatctatactctacaaatcaagactgtatcaagatgcttgtaggaaacaaa 393
|| ||||| ||||| || || |||||||||||||| |||||||||||||| |||||||||
Sbjct: 437 aaggaaatagatctttattcaacaaatcaagactgcatcaagatgcttgttggaaacaaa 496
Query: 394 gttgataaggaaagtgaaagggttgtcagcaa-aaaggaagggattgactttgctaggg- 451
|| || ||||| ||||| |||||||| || || ||| || || || |||||||| ||||
Sbjct: 497 gtagacaaggagagtgatagggttgtgagtaagaaaagagggaatagactttgccaggga 556
Query: 452 aatatgg-atgtct-ttatactgaatgtagtgcaaaaacccgagtaaatgttgtgcagtg 509
||||||| ||||| || || ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 557 aatatggtttgtctattttatcgaatgcagtgctaaaactcgagttaacgtacagcagtg 616
Query: 510 -ttttgaagagcttgtaatgaagattttggagacaccaagcctcttggctgatggctc 566
||||||||| ||||| ||||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 617 cttttgaagaacttgttttgaagattttggatacacccagcctcttagctgaaggctc 674
>gnl|LJGI|TC67644 UniRef100_Q40206 Cluster: RAB1X; n=1; Lotus japonicus|Rep: RAB1X -
Lotus japonicus, complete
Length = 1129
Score = 73.8 bits (37), Expect = 1e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 202 atttgggacacagctggacaggaaaggtttagaacacttactagttcatattatagagga 261
|||||||||||||| |||||||||||||| || || || || ||||| || |||||||||
Sbjct: 305 atttgggacacagcgggacaggaaaggttcaggactctaaccagttcttactatagagga 364
Query: 262 gcacaaggaataattatggtatatgatgt 290
|| |||||||| ||| | || ||||||||
Sbjct: 365 gcgcaaggaatcattcttgtttatgatgt 393
>gnl|LJGI|TC67279 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus japonicus|Rep: RAB1A -
Lotus japonicus, complete
Length = 956
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 253 tatagaggagcacaaggaataattatggtatatgatgt 290
|||||||||||||| ||||||||||| || ||||||||
Sbjct: 282 tatagaggagcacatggaataattattgtctatgatgt 319
>gnl|LJGI|TC57519 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus japonicus|Rep: RAB1A -
Lotus japonicus, complete
Length = 885
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 253 tatagaggagcacaaggaataattatggtatatgatgt 290
|||||||||||||| ||||||||||| || ||||||||
Sbjct: 360 tatagaggagcacatggaataattattgtctatgatgt 397