Miyakogusa Predicted Gene

Lj0g3v0328469.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0328469.1 tr|D8QY72|D8QY72_SELML Cytosine-specific
methyltransferase OS=Selaginella moellendorffii
GN=MET1-1_2,45.71,5e-19,seg,NULL; DNA (CYTOSINE-5)-METHYLTRANSFERASE 1
(DNMT1),NULL; CYTOSINE-SPECIFIC METHYLTRANSFERASE,C-5,CUFF.22358.1
         (478 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65549 similar to UniRef100_O49022 Cluster: Cytosine-s...   250   7e-66

>gnl|LJGI|TC65549 similar to UniRef100_O49022 Cluster: Cytosine-specific
           methyltransferase; n=1; Pisum sativum|Rep:
           Cytosine-specific methyltransferase - Pisum sativum
           (Garden pea), partial (18%)
          Length = 1054

 Score =  250 bits (126), Expect = 7e-66
 Identities = 365/444 (82%), Gaps = 3/444 (0%)
 Strand = Plus / Plus

                                                                       
Query: 21  gaagcgaagtatgtcagagagaagtgagcagctttccgatacctgcagaaacccaaaaca 80
           |||||| ||| ||||| |||| |||||||||| | | | ||| |||| ||  ||||||| 
Sbjct: 223 gaagcggagtttgtcaaagagcagtgagcagcctgctgctacttgcaaaaggccaaaacg 282

                                                                       
Query: 81  agctgtgtcatgtgataatttgaaggagagatccatttccacatctaagaagtcttgtct 140
           |||||   ||||||| ||||| ||||||| |||  |||||| |||| |||| || |||||
Sbjct: 283 agctgcagcatgtgaaaatttcaaggagaaatctttttccatatctgagaaatcctgtct 342

                                                                       
Query: 141 tactgaaataaagaaggatcaggttgtggaagaagaa---ctggctgtccgcctgacttc 197
           || ||||  ||||||||| ||| |||| || ||||||   || |||||||||||||| | 
Sbjct: 343 tattgaatcaaagaaggaccagattgtagatgaagaaatacttgctgtccgcctgacctg 402

                                                                       
Query: 198 tgatcaggatgatggtcgtccaaatagaagaattacagactttgttctgcatgatgaaag 257
           ||  ||||| ||||| ||||||||||| ||| ||||||||||| | || |||||||||||
Sbjct: 403 tggacaggacgatggccgtccaaataggagacttacagactttatccttcatgatgaaag 462

                                                                       
Query: 258 tggcacaggacaacctcttgagatgctggaagtgaaggatttgtttatttctggagttat 317
           ||| |||| ||| || ||||||||||||||| | || ||||| |||||  |||| |||||
Sbjct: 463 tggtacagcacagccacttgagatgctggaaattaatgatttatttatcactggggttat 522

                                                                       
Query: 318 attgccacttgaagtaagtactgaaaagaaaaaagagaaacgcattagatgtgaaggctt 377
           || |||||| |||| |||||| || |||||||| |||||  |  ||||||||||||||||
Sbjct: 523 atcgccactagaaggaagtacagagaagaaaaaggagaacggtgttagatgtgaaggctt 582

                                                                       
Query: 378 tggacgcattgaatcatgggatatatctggttatgaagatggatctcctgtgatatggct 437
           ||| || || |||||||||||||||||||| ||||||||||| ||||| || |||||| |
Sbjct: 583 tggtcgaatcgaatcatgggatatatctggatatgaagatggctctccagttatatggat 642

                                   
Query: 438 ttcaattgatatggctgattatga 461
           ||| | |||||| |||||||||||
Sbjct: 643 ttcgactgatattgctgattatga 666