Miyakogusa Predicted Gene
- Lj0g3v0328439.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0328439.2 tr|G7J381|G7J381_MEDTR LMBR1 domain-containing
protein-like protein OS=Medicago truncatula GN=MTR_3g,82.5,0,seg,NULL;
LMBR1,LMBR1-like membrane protein; UNCHARACTERIZED,NULL;
coiled-coil,NULL,CUFF.22369.2
(1668 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66542 similar to UniRef100_A7R1G9 Cluster: Chromosome... 573 e-162
gnl|LJGI|TC60920 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 inte... 248 1e-64
gnl|LJGI|FS339411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 int... 147 3e-34
gnl|LJGI|DC597925 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 int... 137 2e-31
gnl|LJGI|BW628411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 int... 125 1e-27
gnl|LJGI|FS359096 weakly similar to UniRef100_A7R1G9 Cluster: Ch... 56 7e-07
gnl|LJGI|TC76432 weakly similar to UniRef100_A7R1G9 Cluster: Chr... 56 7e-07
>gnl|LJGI|TC66542 similar to UniRef100_A7R1G9 Cluster: Chromosome undetermined
scaffold_354, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_354, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(15%)
Length = 962
Score = 573 bits (289), Expect = e-162
Identities = 295/297 (99%)
Strand = Plus / Plus
Query: 1372 ccagcatctaaacggaaggcagaagagaaaaatgaagcctctgccaattccgtccttgat 1431
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 287 ccagcatttaaacggaaggcagaagagaaaaatgtagcctctgccaattccgtccttgat 346
Query: 1432 aaaggcagtaattccggtggagcgccttcttcaggtttggcttcgacgtggctaaatatg 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aaaggcagtaattccggtggagcgccttcttcaggtttggcttcgacgtggctaaatatg 406
Query: 1492 aagacaggatttcagagtttcaaggccaacataggagccaagaagtttttaccaatacgg 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aagacaggatttcagagtttcaaggccaacataggagccaagaagtttttaccaatacgg 466
Query: 1552 caaatacaggaaagtaatgtgtcttgtgtgtcgtcatctgagtcccttgatgagatattt 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 caaatacaggaaagtaatgtgtcttgtgtgtcgtcatctgagtcccttgatgagatattt 526
Query: 1612 caaagactcaaagggacttctttggaccaaaatacttacaatgaagaggactaagag 1668
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 caaagactcaaagggacttctttggaccaaaatacttacaatgaagaggactaagag 583
Score = 464 bits (234), Expect = e-130
Identities = 237/238 (99%)
Strand = Plus / Plus
Query: 1134 tcttgatccatcaggagtaattattttacaaagagagcggtcttggcttgaacaaggaca 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgatccatcaggagtaattattttacaaagagagcggtcttggcttgaacaaggaca 60
Query: 1194 caaagtaggggaacaagttgttcccctggcaaggaattttaatggtgttgatattgaatc 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaagtaggggaacaagttgttcccctggcaaggaattttaatggtgttgatattgaatc 120
Query: 1254 ggcaaacaatttaatggagagacatgtcgaaatgaagacaaattccgatgtaattaccga 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcaaacaatttaatggagagacatgtcgaaatgaagacaaattccgatgtaattaccga 180
Query: 1314 agaaaccaatggactgtctaaaagttcgagggaagagacaagcagatatggttcgagc 1371
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 agaaaccaatggactgtctaaaagttcgagggaagagacaagcaggtatggttcgagc 238
>gnl|LJGI|TC60920 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (31%)
Length = 761
Score = 248 bits (125), Expect = 1e-64
Identities = 239/277 (86%)
Strand = Plus / Plus
Query: 1 atggcttgttcaaatacttttggacttgttactggtgcatttcttcttggctttggtttg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 485 atggcttgttcgaatacttttggacttgttactggtgcatttcttcttggcttcggttta 544
Query: 61 agtgaaattcctaaaagcatttggagaaacgctgagtggaccacccgccaaaaagtactt 120
||||||||||| ||| | |||||||||| |||| |||||||||||||| ||||| |||
Sbjct: 545 agtgaaattcccaaaggtgtttggagaaattctgactggaccacccgccagaaagtcctt 604
Query: 121 tctcacaaaatttcccaaatggctgtcaaactcgatgatgctcaccaagaactttcaaat 180
|| ||||||||| | |||||||||||||||| || ||||| || || |||||||| |||
Sbjct: 605 tcccacaaaattgctaaaatggctgtcaaacttgacgatgcacatcatgaactttcgaat 664
Query: 181 gccattgttgttgctcaagcaacatccaagcagatgtccaagcgtgatcctttgagacgt 240
|| ||||||||||||||||| ||||| | ||||||||||||||| ||||| ||||||
Sbjct: 665 gctattgttgttgctcaagccacatcaaggcagatgtccaagcgcgatccactgagacca 724
Query: 241 tatatggatgtcattgatgatatgcttgctcaaatgt 277
|| |||||||| ||||| | ||||| |||||||||
Sbjct: 725 tacatggatgtagttgataaaatgctaactcaaatgt 761
>gnl|LJGI|FS339411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (22%)
Length = 775
Score = 147 bits (74), Expect = 3e-34
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 atggcttgttcaaatacttttggacttgttactggtgcatttcttcttggctttggtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 atggcttgttcaaatacttttggacttgttactggtgcatttcttcttggctttggtttg 761
Query: 61 agtgaaattcctaa 74
||||||||||||||
Sbjct: 762 agtgaaattcctaa 775
>gnl|LJGI|DC597925 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (21%)
Length = 573
Score = 137 bits (69), Expect = 2e-31
Identities = 99/109 (90%)
Strand = Plus / Plus
Query: 1 atggcttgttcaaatacttttggacttgttactggtgcatttcttcttggctttggtttg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 465 atggcttgttcgaatacttttggacttgttactggtgcatttcttcttggcttcggttta 524
Query: 61 agtgaaattcctaaaagcatttggagaaacgctgagtggaccacccgcc 109
||||||||||| ||| | |||||||||| |||| |||||||||||||
Sbjct: 525 agtgaaattcccaaaggtgtttggagaaattctgactggaccacccgcc 573
>gnl|LJGI|BW628411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (19%)
Length = 486
Score = 125 bits (63), Expect = 1e-27
Identities = 105/119 (88%)
Strand = Plus / Plus
Query: 757 atgtatatgtgcatgtgcacatactattccttgttcaaaattggaatgttgatgttttac 816
||||||||||| | ||||| || | ||||||||| ||||| |||| | |||||||||||
Sbjct: 92 atgtatatgtgtgtctgcacgtatttttccttgtttaaaatgggaacgatgatgttttac 151
Query: 817 tcactgacacccagacagactagctcagttaacttgcttatgatatgctcgatggttgc 875
||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 152 tcactaacaccaagacaaactagctcagttagcttgcttatgatatgctcgatggttgc 210
>gnl|LJGI|FS359096 weakly similar to UniRef100_A7R1G9 Cluster: Chromosome undetermined
scaffold_354, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_354, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(11%)
Length = 662
Score = 56.0 bits (28), Expect = 7e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1588 tctgagtcccttgatgagatatttcaaagact 1619
||||||||||||||||| ||||||||||||||
Sbjct: 329 tctgagtcccttgatgatatatttcaaagact 298
Score = 54.0 bits (27), Expect = 3e-06
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 1489 atgaagacaggatttcagagtttcaaggccaacataggagccaagaagtttttaccaata 1548
||||| ||||| ||| ||||||||||||||||| |||| | ||| ||||||||| ||
Sbjct: 434 atgaaaacaggctttaagagtttcaaggccaacgtaggggacaaagggtttttacccatg 375
Query: 1549 cggcaaatacaggaa 1563
||||||| |||||||
Sbjct: 374 cggcaaacacaggaa 360
>gnl|LJGI|TC76432 weakly similar to UniRef100_A7R1G9 Cluster: Chromosome undetermined
scaffold_354, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_354, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(11%)
Length = 664
Score = 56.0 bits (28), Expect = 7e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1588 tctgagtcccttgatgagatatttcaaagact 1619
||||||||||||||||| ||||||||||||||
Sbjct: 324 tctgagtcccttgatgatatatttcaaagact 355