Miyakogusa Predicted Gene
- Lj0g3v0328379.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0328379.1 tr|F0T0Z4|F0T0Z4_SYNGF Formylmethanofuran
dehydrogenase subunit E region OS=Syntrophobotulus
glycoli,26.76,7.2,seg,NULL,CUFF.22355.1
(249 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS328500 similar to UniRef100_Q67YP2 Cluster: MRNA, com... 70 7e-12
gnl|LJGI|TC67841 similar to UniRef100_A7PIM6 Cluster: Chromosome... 70 7e-12
gnl|LJGI|GO026406 weakly similar to UniRef100_Q9EMR9 Cluster: AM... 62 2e-09
gnl|LJGI|BW596307 similar to UniRef100_A7P237 Cluster: Chromosom... 62 2e-09
gnl|LJGI|TC66550 similar to UniRef100_Q58FA7 Cluster: NADH-ubiqu... 58 3e-08
gnl|LJGI|TC63648 58 3e-08
gnl|LJGI|TC60014 weakly similar to UniRef100_Q5CQK2 Cluster: Pro... 58 3e-08
gnl|LJGI|TC79573 similar to UniRef100_Q67Z63 Cluster: Mitochondr... 52 2e-06
gnl|LJGI|TC77337 similar to UniRef100_Q67YP2 Cluster: MRNA, comp... 52 2e-06
>gnl|LJGI|FS328500 similar to UniRef100_Q67YP2 Cluster: MRNA, complete cds, clone:
RAFL24-17-M19; n=1; Arabidopsis thaliana|Rep: MRNA,
complete cds, clone: RAFL24-17-M19 - Arabidopsis
thaliana (Mouse-ear cress), partial (6%)
Length = 788
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 8 aaggagaaggacaagagatgatgatggaaagtaggaaattttc 50
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 184 aaggagaaggacaagagatgatgatggaaagtacaaaattttc 226
>gnl|LJGI|TC67841 similar to UniRef100_A7PIM6 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 2159
Score = 69.9 bits (35), Expect = 7e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 8 aaggagaaggacaagagatgatgatggaaagtaggaaattttc 50
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 351 aaggagaaggacaagagatgatgatggaaagtacaaaattttc 393
Score = 60.0 bits (30), Expect = 7e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 144 tggatcagaagaagcagagaagatgatgga 173
||||||||||||||||||||||||||||||
Sbjct: 859 tggatcagaagaagcagagaagatgatgga 888
>gnl|LJGI|GO026406 weakly similar to UniRef100_Q9EMR9 Cluster: AMV130; n=1; Amsacta
moorei entomopoxvirus 'L'|Rep: AMV130 - Amsacta moorei
entomopoxvirus, partial (1%)
Length = 654
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 20 aagagatgatgatggaaagtaggaaattttcgtcaccat 58
||||||||||||||||||||| | |||||||||||||||
Sbjct: 222 aagagatgatgatggaaagtacggaattttcgtcaccat 260
>gnl|LJGI|BW596307 similar to UniRef100_A7P237 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 468
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 8 aaggagaaggacaagagatgatgatggaaagtaggaaattttcgtca 54
||||||||||| ||||| ||||||||||||||| ||||||| |||||
Sbjct: 89 aaggagaaggagaagagttgatgatggaaagtatgaaatttccgtca 135
>gnl|LJGI|TC66550 similar to UniRef100_Q58FA7 Cluster: NADH-ubiquinone oxidoreductase
chain 5; n=1; Bombina orientalis|Rep: NADH-ubiquinone
oxidoreductase chain 5 - Bombina orientalis (Oriental
fire-bellied toad), partial (3%)
Length = 1308
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 145 ggatcagaagaagcagagaagatgatgga 173
|||||||||||||||||||||||||||||
Sbjct: 295 ggatcagaagaagcagagaagatgatgga 323
>gnl|LJGI|TC63648
Length = 982
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 145 ggatcagaagaagcagagaagatgatgga 173
|||||||||||||||||||||||||||||
Sbjct: 708 ggatcagaagaagcagagaagatgatgga 736
>gnl|LJGI|TC60014 weakly similar to UniRef100_Q5CQK2 Cluster: Protein with 8
transmembrane domains, possible amino alcohol
phosphotransferase; n=1; Cryptosporidium parvum Iowa
II|Rep: Protein with 8 transmembrane domains, possible
amino alcohol phosphotransferase - Cryptosporidium
parvum Iowa II, partial (6%)
Length = 1232
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 145 ggatcagaagaagcagagaagatgatgga 173
|||||||||||||||||||||||||||||
Sbjct: 39 ggatcagaagaagcagagaagatgatgga 67
>gnl|LJGI|TC79573 similar to UniRef100_Q67Z63 Cluster: Mitochondrial carrier like
protein; n=1; Arabidopsis thaliana|Rep: Mitochondrial
carrier like protein - Arabidopsis thaliana (Mouse-ear
cress), partial (8%)
Length = 1206
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 17 gacaagagatgatgatggaaagtaggaaattttc 50
|||||||||||||||||||||||| ||||||||
Sbjct: 1 gacaagagatgatgatggaaagtacaaaattttc 34
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 144 tggatcagaagaagcagagaagatgatgga 173
||||||||||||| ||||||||||||||||
Sbjct: 414 tggatcagaagaaacagagaagatgatgga 443
>gnl|LJGI|TC77337 similar to UniRef100_Q67YP2 Cluster: MRNA, complete cds, clone:
RAFL24-17-M19; n=1; Arabidopsis thaliana|Rep: MRNA,
complete cds, clone: RAFL24-17-M19 - Arabidopsis
thaliana (Mouse-ear cress), partial (6%)
Length = 814
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 144 tggatcagaagaagcagagaagatgatgga 173
||||||||||||| ||||||||||||||||
Sbjct: 144 tggatcagaagaaacagagaagatgatgga 173