Miyakogusa Predicted Gene

Lj0g3v0328149.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0328149.1 Non Chatacterized Hit- tr|J3LWY5|J3LWY5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,27.4,7e-18,Kinesin-related,Kinesin-related conserved domain;
coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NU,CUFF.22338.1
         (1491 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024511 similar to UniRef100_A7P0F8 Cluster: Chromosom...   779   0.0  

>gnl|LJGI|GO024511 similar to UniRef100_A7P0F8 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 698

 Score =  779 bits (393), Expect = 0.0
 Identities = 403/405 (99%), Gaps = 1/405 (0%)
 Strand = Plus / Plus

                                                                       
Query: 68  ttgataatgaaattgatgaagaggtaaatgtgggcgaggaggacataaggcaattacgcc 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttgataatgaaattgatgaagaggtaaatgtgggcgaggaggacataaggcaattacgcc 354

                                                                       
Query: 128 agcagattgatgaattgtacatgtcatgtgaagggaatcctaaagacatatctgtcagtg 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agcagattgatgaattgtacatgtcatgtgaagggaatcctaaagacatatctgtcagtg 414

                                                                       
Query: 188 aagattgtgtcccgtattattctgttgaggaaagttgtgatacagatatgaccagctgtg 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aagattgtgtcccgtattattctgttgaggaaagttgtgatacagatatgaccagctgtg 474

                                                                       
Query: 248 atgaaattgaaaaagaggaagtatgttcaaaagaaacatcaagtgatctttgtcacaagg 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atgaaattgaaaaagaggaagtatgttcaaaagaaacatcaagtgatctttgtcacaagg 534

                                                                       
Query: 308 acagcgcggcaccagaagacacctcaagggcaattaaatctactttcagagagagcattt 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 acagcgcggcaccagaagacacctcaagggcaattaaatctactttcagagagagcattt 594

                                                                       
Query: 368 cggttagttcatgctgccggtctccaatacttgaagaaccactgttgtctgagtctccaa 427
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 595 cggttagttcgtgctgccggtctccaatacttgaagaaccactgttgtctgagtctcc-a 653

                                                        
Query: 428 aaatcagcaatataaagaggaaaagtgtggctttttcatctagtt 472
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aaatcagcaatataaagaggaaaagtgtggctttttcatctagtt 698



 Score =  111 bits (56), Expect = 1e-23
 Identities = 59/60 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttcgtagctcagatgggagtaaaaatggatacctccaagtacgtgatgtccgggaaa 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 184 atgttcgtagctcagatgggagtaaaaatggttacctccaagtacgtgatgtccgggaaa 243