Miyakogusa Predicted Gene

Lj0g3v0328009.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0328009.1 tr|B9IFA6|B9IFA6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_666660 PE=4 SV=1,60,0.0001,
,CUFF.22323.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9...   107   5e-23
gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chr...    94   8e-19
gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosom...    84   8e-16

>gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9C16.15; n=1;
           Arabidopsis thaliana|Rep: F9C16.15 - Arabidopsis
           thaliana (Mouse-ear cress), partial (3%)
          Length = 651

 Score =  107 bits (54), Expect = 5e-23
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaggaacaagattttgcttatacatgtgagatgtggtctcattcttgatgcacgcaag 60
           |||||||||| |||||||||||||||||| |||| ||||||||| |||||||||| ||||
Sbjct: 447 atgaggaacatgattttgcttatacatgtcagatatggtctcatgcttgatgcacacaag 506

                             
Query: 61  ctgtttgatgatattcct 78
            |||||||||||||||||
Sbjct: 507 ttgtttgatgatattcct 524


>gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 1047

 Score = 93.7 bits (47), Expect = 8e-19
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaggaacaagattttgcttatacatgtgagatgtggtctcattcttgatgcacgcaag 60
           |||| ||||||| |||||| ||| |||||||||||||||||||| |||||||||||||||
Sbjct: 649 atgatgaacaaggttttgcatatgcatgtgagatgtggtctcatgcttgatgcacgcaag 708

                  
Query: 61  ctgtttg 67
           |||||||
Sbjct: 709 ctgtttg 715


>gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 741

 Score = 83.8 bits (42), Expect = 8e-16
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaggaacaagattttgcttatacatgtgagatgtggtctcattcttgatgcacgcaag 60
           |||| ||||| | |||||||||| ||||||| |||||||||||| || ||||| ||||||
Sbjct: 569 atgatgaacagggttttgcttatgcatgtgaaatgtggtctcatgctcgatgcgcgcaag 628

                                 
Query: 61  ctgtttgatgatattcctgaga 82
           ||||||| |||||| |||||||
Sbjct: 629 ctgtttggtgatatgcctgaga 650