Miyakogusa Predicted Gene

Lj0g3v0327989.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0327989.1 tr|B9HVS3|B9HVS3_POPTR Cytokinin receptor 1B
OS=Populus trichocarpa GN=CRE1B PE=2
SV=1,50,2e-19,coiled-coil,NULL,gene.g25597.t1.1
         (321 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP052044 similar to UniRef100_A7QP43 Cluster: Chromosom...   311   1e-84

>gnl|LJGI|BP052044 similar to UniRef100_A7QP43 Cluster: Chromosome chr1 scaffold_136,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_136, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 456

 Score =  311 bits (157), Expect = 1e-84
 Identities = 166/169 (98%)
 Strand = Plus / Minus

                                                                       
Query: 153 cattgcactccttcttgcacaaatttcctatgcttctgtgcttcatattgcaaaagtaga 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 456 cattgcactccttcttgcacaaatttcctatgcttctgtgcttcatattgccaaagtaga 397

                                                                       
Query: 213 agaagattaccgtgagatgatggagctgaaagaacgagctgaggcagctgatgttgcaaa 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 396 agaagattaccgtgagatgatggagctgaaagaacgagctgaggcagctgatgttgccaa 337

                                                            
Query: 273 atcccagctttcttgctacttgtctcccgtgagatcagaacaccaatga 321
           |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 336 atcccagctttcttgctacttgtctcccgtgagatcagaacacccatga 288