Miyakogusa Predicted Gene
- Lj0g3v0327759.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0327759.1 Non Chatacterized Hit- tr|K3YT65|K3YT65_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017463,25.81,8e-19,TARGET OF MYB1 RELATED (TOM1 - RELATED),
PLANT,NULL; VHS DOMAIN CONTAINING PROTEIN FAMILY,NULL;
ENTH,gene.g25583.t1.1
(915 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81462 weakly similar to UniRef100_A7Q1S7 Cluster: Chr... 248 5e-65
gnl|LJGI|TC63257 similar to UniRef100_A7Q1S7 Cluster: Chromosome... 220 1e-56
>gnl|LJGI|TC81462 weakly similar to UniRef100_A7Q1S7 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 1218
Score = 248 bits (125), Expect = 5e-65
Identities = 251/293 (85%)
Strand = Plus / Plus
Query: 509 ctcctaaataccttcccatgtcaaatgaagagaagaaagtgcatcttgtggctgctcaag 568
||||||| ||||| |||| ||| ||||||||||||||| | |||||||||||||| |
Sbjct: 634 ctcctaattacctacccacctcagatgaagagaagaaaggtcgtcttgtggctgctcgaa 693
Query: 569 acagatttgaattgttctctagcatagtatattctgagggagagccaacacctttgaagg 628
|||| |||||||| ||||||||||| || ||| |||| |||||| | |||||| ||||
Sbjct: 694 acagtcttgaattgctctctagcatattaaattttgagcaagagcctaaacctttaaagg 753
Query: 629 aagatttaactttgagcttgttggatgactgcaagctatcactcgctgccatgaagagga 688
|||||| |||||||||||||||| |||||||||||||||| |||| | ||| |||||||
Sbjct: 754 aagattcaactttgagcttgttgaatgactgcaagctatcgctcggttacatcaagagga 813
Query: 689 ttttggaaagaactacaaatgatgaagtgacaaatattgaggcattatatctcaatgatg 748
|| ||||||| ||||||||||||||||||||| | ||||||| ||||||||||||||||
Sbjct: 814 ttgtggaaagcactacaaatgatgaagtgacagtttttgaggctttatatctcaatgatg 873
Query: 749 agctggaacagctagtttcccaatttgatgatctggaagttgctcaaatgtac 801
||||| |||| || ||||| ||| ||| |||||||| |||||||||||||||
Sbjct: 874 agctgcaacaattaatttccaaatatgaggatctggatgttgctcaaatgtac 926
Score = 210 bits (106), Expect = 1e-53
Identities = 244/290 (84%)
Strand = Plus / Plus
Query: 2 tgatcaatactggccagttgaatggtacagaggtgatgttggccgttaagaggaagatca 61
|||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||
Sbjct: 172 tgatcaatactggccagttgaaggattcagaggtgatcatggccgttaagaggaagatca 231
Query: 62 accatgagagccccattgtgcagggccttgcccttgatatgttggaaacctttgccgtgt 121
|||||| ||||| |||||| | |||| |||||||| ||||||||||||||| ||
Sbjct: 232 accatgttagccctgttgtgcggagcctcacccttgatttgttggaaacctttgatacgt 291
Query: 122 actgtaacatggtgttctctaaagtggtgtctgagatggttcttgaggatatgacttggt 181
|||||||||||||||||||| || |||| ||||||||| |||||||||| |||||||||
Sbjct: 292 actgtaacatggtgttctctgaaatggtttctgagatgcttcttgaggacttgacttggt 351
Query: 182 ttatttataacccgcatgctgataaacataatcaaaagaaggctctccagttgatagagt 241
| ||| |||||||||| | | | || || ||||||||||||||| | ||||||||
Sbjct: 352 tgattcataacccgcaatcccgtcatcaggataaaaagaaggctctccgggtgatagaga 411
Query: 242 cttgggctaacctagggtatcctgactatcttggtctgttacgtgaaagt 291
||||||||||| |||| ||||||||||||||| |||| |||| |||||
Sbjct: 412 cttgggctaactcagggaatcctgactatcttgcactgtcacgtcaaagt 461
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 393 tctttacttggattctacactttcccgctatacacataaagaccctttgg 442
|||||| |||||||||||||||||| ||||||||| |||||||| ||||
Sbjct: 512 tctttatttggattctacactttccttctatacacagaaagacccgttgg 561
>gnl|LJGI|TC63257 similar to UniRef100_A7Q1S7 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1523
Score = 220 bits (111), Expect = 1e-56
Identities = 255/303 (84%)
Strand = Plus / Plus
Query: 534 tgaagagaagaaagtgcatcttgtggctgctcaagacagatttgaattgttctctagcat 593
|||||||||||||| |||||| |||| ||||| | |||| |||| ||| ||||||||||
Sbjct: 832 tgaagagaagaaagagcatctcgtggttgctcgaaacagtcttgagttgctctctagcat 891
Query: 594 agtatattctgagggagagccaacacctttgaaggaagatttaactttgagcttgttgga 653
| || ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 892 attaaattctgaggcagagccaaaacctttgaaggaagatttagctttgagcttgttgga 951
Query: 654 tgactgcaagctatcactcgctgccatgaagaggattttggaaagaactacaaatgatga 713
| | ||||||| ||||||| ||| ||| ||| |||| ||||||| ||||||||||||||
Sbjct: 952 taagtgcaagcaatcactctctgtcatcaaggagattgtggaaagcactacaaatgatga 1011
Query: 714 agtgacaaatattgaggcattatatctcaatgatgagctggaacagctagtttcccaatt 773
||||||| | ||||||| || ||||| |||||||| ||| ||||| |||||||| | |
Sbjct: 1012 agtgacactttttgaggctttgtatcttaatgatgaactgcaacaggtagtttccaatta 1071
Query: 774 tgatgatctggaagttgctcaaatgtacggggcacaacaacctcaaaacgctgactctgc 833
||| || |||||| ||||||| | |||||||||||||||| ||| |||||| ||||
Sbjct: 1072 tgaggagttggaagctgctcaaggatctggggcacaacaacctccaaatgctgaccctgc 1131
Query: 834 caa 836
|||
Sbjct: 1132 caa 1134