Miyakogusa Predicted Gene
- Lj0g3v0327699.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0327699.1 Non Chatacterized Hit- tr|I1KW41|I1KW41_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6581
PE=,43.7,1e-18,FAMILY NOT NAMED,NULL; zf-C3HC4_3,NULL; no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_2,Zi,CUFF.22303.1
(480 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV419591 similar to UniRef100_A8EY84 Cluster: Actin pol... 280 8e-75
gnl|LJGI|TC61685 similar to UniRef100_Q6YYC5 Cluster: Copine I-l... 174 3e-43
gnl|LJGI|GO011010 similar to UniRef100_Q9SAL0 Cluster: T8K14.20 ... 168 2e-41
gnl|LJGI|TC82550 similar to UniRef100_Q6YYC5 Cluster: Copine I-l... 70 1e-11
>gnl|LJGI|AV419591 similar to UniRef100_A8EY84 Cluster: Actin polymerization protein
RickA; n=1; Rickettsia canadensis str. McKiel|Rep: Actin
polymerization protein RickA - Rickettsia canadensis
(strain McKiel), partial (4%)
Length = 259
Score = 280 bits (141), Expect = 8e-75
Identities = 147/149 (98%)
Strand = Plus / Plus
Query: 87 ctgtgaagaacgtgatctaagacgaagaggatgggctgattatgaaggcggccgaaggct 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtgaagaacgtgatctaagacgaagaggatgggctgattatgaaggcggccgaaggct 60
Query: 147 atcagatgttgatcaaattcgccatcctccaccaccgtcacagccacgccttgcagttcc 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcagatgttgatcaaattcgccatcctccaccaccgtcacagccacgccttgcagttcc 120
Query: 207 ttgttctccgcctcctgtagtgccgcggc 235
|||||||| ||||||||||||||| ||||
Sbjct: 121 ttgttctcagcctcctgtagtgccacggc 149
Score = 95.6 bits (48), Expect = 2e-19
Identities = 92/108 (85%), Gaps = 9/108 (8%)
Strand = Plus / Plus
Query: 175 ccaccaccgtcacagccacgccttgcagttccttgttctccgcctcctgtagtgccgcgg 234
||||||| | |||| ||||||||| |||||| |||||||| ||||||||||||||| |||
Sbjct: 152 ccaccactgccacaaccacgccttccagttcgttgttctcagcctcctgtagtgccacgg 211
Query: 235 c---------tgccacaaccacttttttctcctgtggaagatgagcca 273
| ||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ccaccaccactgccacaaccacttttttctcctgtggaagatgagcca 259
>gnl|LJGI|TC61685 similar to UniRef100_Q6YYC5 Cluster: Copine I-like protein; n=1;
Oryza sativa Japonica Group|Rep: Copine I-like protein -
Oryza sativa subsp. japonica (Rice), partial (77%)
Length = 1620
Score = 174 bits (88), Expect = 3e-43
Identities = 139/156 (89%)
Strand = Plus / Plus
Query: 325 aaccaaatggtatgtactatttgtttgacaaatggaaaggatttagcctttggatgtggt 384
|||||||||| ||| | |||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 1129 aaccaaatggagtgtgcaatttgtctaacaaatggaaaggatttggcctttggatgtggt 1188
Query: 385 cacatgagttgcagagattgtggatcaaggttaagcaattgtcacatatgccgtcaaagg 444
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||
Sbjct: 1189 cacatgagttgcagagattgtggatccaggttaagcaattgtcacatatgccgtgagagg 1248
Query: 445 atcaccgctcgtgttatgttgtttacgggctgattg 480
||||| |||| ||| | ||||||| |||||||||
Sbjct: 1249 atcacaagtcgtcttagggtgtttactggctgattg 1284
>gnl|LJGI|GO011010 similar to UniRef100_Q9SAL0 Cluster: T8K14.20 protein; n=1;
Arabidopsis thaliana|Rep: T8K14.20 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (10%)
Length = 639
Score = 168 bits (85), Expect = 2e-41
Identities = 115/125 (92%)
Strand = Plus / Plus
Query: 325 aaccaaatggtatgtactatttgtttgacaaatggaaaggatttagcctttggatgtggt 384
|||||||||| ||| | |||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 150 aaccaaatggagtgtgcaatttgtctaacaaatggaaaggatttggcctttggatgtggt 209
Query: 385 cacatgagttgcagagattgtggatcaaggttaagcaattgtcacatatgccgtcaaagg 444
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||
Sbjct: 210 cacatgagttgcagagattgtggatccaggttaagcaattgtcacatatgccgtgagagg 269
Query: 445 atcac 449
|||||
Sbjct: 270 atcac 274
>gnl|LJGI|TC82550 similar to UniRef100_Q6YYC5 Cluster: Copine I-like protein; n=1;
Oryza sativa Japonica Group|Rep: Copine I-like protein -
Oryza sativa subsp. japonica (Rice), partial (58%)
Length = 1091
Score = 69.9 bits (35), Expect = 1e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 344 tttgtttgacaaatggaaaggatttagcctttggatgtggtcacatgagttgcagagatt 403
||||| |||| ||||||| ||||| || ||||||||||| ||||||| ||||||||| |
Sbjct: 657 tttgtctgaccaatggaagagatttggcatttggatgtgggcacatgacttgcagagact 716
Query: 404 gtggatcaaggttaagcaattgtcacatatgccgtcaaaggatcacc 450
||||||| || |||| | ||||| |||||| || || |||||||||
Sbjct: 717 gtggatccagattaactagttgtcccatatgtcgccagaggatcacc 763